Detail information of g395219


Location
GeneChrStartEndStrand
g395219Scaffold_76161:HRSCAF_4592473433856645+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020249428.11.4e-122transcription factor-like protein DPB
SwissprotQ9FNY2.13.5e-97E2F dimerization partner protein B
trEMBLA0A1U7YP911.0e-117transcription factor-like protein DPB

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G03415.174.812e-110 395ATDPB;DPBTranscription factor DP

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag395218.t1; g395219.t1; g72762.t1
Allium fistulosumAfisC3G03580; AfisC3G07690
Allium sativumAsa0G04987.1; Asa0G04988.1; Asa2G02870.1; Asa2G06359.1; Asa6G00659.1
Arabidopsis thalianaAT5G03415.1; AT5G03415.2
Oryza sativaLOC_Os03g05760.1; LOC_Os10g30420.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02319.17E2F_TDPDomain10018187.83.1e-25
PF08781.7DPDomain189302129.57.2e-38

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04683TFDP1; transcription factor Dp-1EC:- TGF-beta signaling pathwayko04350
Cell cycleko04110
K09392TFDP2; transcription factor Dp-2EC:- Cell cycleko04110

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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