result

Gene information

Detail information of g39888

Location

Gene	Chr	Start	End	Strand
g39888	Scaffold_23842:HRSCAF_220825	1192836	1195207	-

Sequences

CDS

Protein

Gene

>g39888.t1
ATGATGGATGCTACCATTACAATCTTGCTTTCACTTCTTGCATACCTAGTACTCAATACTTGTGCCAAGTTTGTAAAAAGAATATGGTGGGAACCAATACGCATAACCAAGATGATGGAGGCCCAAGGAGTTAGAGGACCTCCGTACAGACTCTTGCATGGAAACTCCAAAGAAGCCGATAAAATGGTCAAATCAGTGATGGCAAAACCTATGACTCAACTATCTCATGATATTCGCCATAGAATCTTGCCCTATCTTCATACCTGGGTCCAACAATATGGTATATCTCTCATTAGTATTTAATCCATATCTACTGTTTGTGGCTATGTTTCATCAAGGCGGCTTAGGCAATTTTAAAACAGGAATTAATTTCGCTTATTCACAGTACGGGTGGTACTCTAAAATTTAAGTCTAAAATGTCATATCACTAACCAATAAAGTTAATGGTCCTTGATCAAAACATTATTGATTTCATGGTTAAACTTAGAGGCTTAGGAGTAAATTTCAGTAACAAATCAGTAAAAGTTACAAACTCCGAAGTTAGCACGCGTGCCGATGTTCATGCTTATGATCTTACCATTTAAGGGAACAAATGAATGAAACAGGAATTGTGTTTCTCAAATGGCAAGGTACAACGCCACAGTTGGTTACAACAGAACCAGATATGATAAAAGATGTCTTGAACAACAAAGATGGAGCTTTCATTAAGGCTCGTATATCTAAATTTTCACAAAAGCTTCTCGGAGATGGTCTAGCAACAGCTGAGGGAACAAAATGGGTCAGGCAGCGAAAATTAGCTAACCAAGCTTTTCGGGCTGAAAGCCTCAAGGTATGATTATAACTAATTATCATTTTCATCGGACTTACATATGCTTGTCGTACAAGTATTTAATGCATCTTCATCATAAAGTTCACACTAATGCGATAACAGACATTCATAAATTATGCTATCAGGGAATGATTCCAGAAATTGTGACTAGTGTAGAAGACATGCTTAAGAACTGGGCAGTATACGATGAAAGCAAAGAGGCTGATGTATTCAAAGAATATACAGTTTTAGCAGCTGATTTCATTTCAAGAACAGCTTTCACCAGTAGTTATTTACAAGGAAAGAAGTTTTTCCAAAAGCTGGACGAGCTAACCAAAATCGTTGCTAGAAACGCTGAAATTGTACATTTCAGATTCCTCAGGTACTATGTTTAGCCCATATGGCAAGCTTTCTACTTCCTGTACGTATCTAAAAGTTAATCAAAATTTGCAGATTTTTACCGCAAGATAAGGATGAAAAGGAAGCAAACAGAATAGAACAAGAAATAAGAAATATTATTCTAGGACTAATTAAAACAAGAGAGGAAAGCAATGATACAGGGAAGTTAGATGGTTATGGAAACGACTTATTTGGACTGCTTCTGAAAGCAAATCACGAACATGAAGATGATAAAAGGATCAGTGTTGATGACATAATCGATGAATGCAAAACATTCTATTTTGCAGGACAGGAAACCACTACATTGGTGCTTTCATGGACTACCCTACTTCTAGCTATAAACACGGAATGGCAGGAGATGGCGAGGGAAGAATCATTCGAAATATTTGGTGGAAAGCACCCTACTTCTAACGATGCTGGGAAAATCACTAAGTTAAAGACGGTAAGCAAAAAGTATGAAATTTTTTCCACATAATATGAATAAGTCACGTTAACTGTTCCAACATTAATTCCTTCGTTCTCTTATTTGTGTGTCCTTTATTCTCATGAGATCTACACCATTAAATCTGAGCATGGATCTCATCAATTATTATTTTTGTAGGAACATGGAACACGAAAGTTGGAATAGAGGACGTCCATATGAAATTTTATTATGCATATGCACAGAATATAAATGTGATAGTGACATGATATTTTAGACGATTAATATCGTTAAAAAATAGTACATTAATTGCAGATGACCATGATAATCAACGAGGCACTAAGGTTATACACGCCTCCGGTTGTATTCGTGAGGCAAGCAGTGAAAGAAGTAAAACTGGGAAGATTTACCGTGCCAAAAGACATGCAAATTTTTATGTCAGCAATACCAACTCACCACGACAAAAATCTATGGGGAGATGATGTCCACTTATTCAGGCCAGAAAGATTCAAAGACGGAATTGCTGGAGCAACCACGAATAATATGACGTCTTTTTTCCCATTTGGCGCAGGTCCACGATTCTGCATTGGGCAAGGACTTGCTATGATGGAGGTCAAAATTGCACTTTCTATGATACTGCAGAAGTATAGTTTTACGCTGTCGCCTGCATACATACATGCGCCCACTAGATTGATCACCACCAAGCCTCAACATGGAATTCAACTCATGATTCACAAGTTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020277055.1	2.7e-173	cytochrome P450 CYP749A22-like isoform X1
Swissprot	H2DH17.1	6.2e-135	Cytochrome P450 CYP749A20
trEMBL	A0A200Q335	9.3e-160	Cytochrome P450

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G14610.1	40.32	4e-103	372	CYP72A7	cytochrome P450, family 72, subfamily A, polypeptide 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g39888	AT3G14630.1	516	295	10	8	518	3	508	39.92	4e-103	372
g39888	AT3G14610.1	501	284	9	23	518	22	512	40.32	4e-103	372
g39888	AT2G26710.1	523	300	10	7	518	13	515	36.71	2e-99	359

Ortholog group

Species	Genes
Allium cepa	g39888.t1
Allium fistulosum	AfisC3G01743
Allium sativum	Asa2G00847.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	80	493	254.8	1.3e-75

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0008150	P	biological_process
GO:0008202	P	steroid metabolic process
GO:0008395	F	steroid hydroxylase activity
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009741	P	response to brassinosteroid
GO:0010033	P	response to organic substance
GO:0010268	P	brassinosteroid homeostasis
GO:0010817	P	regulation of hormone levels
GO:0014070	P	response to organic cyclic compound
GO:0016128	P	phytosteroid metabolic process
GO:0016131	P	brassinosteroid metabolic process
GO:0033993	P	response to lipid
GO:0042221	P	response to chemical
GO:0042445	P	hormone metabolic process
GO:0042592	P	homeostatic process
GO:0044238	P	primary metabolic process
GO:0048878	P	chemical homeostasis
GO:0050896	P	response to stimulus
GO:0055088	P	lipid homeostasis
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071704	P	organic substance metabolic process
GO:1901360	P	organic cyclic compound metabolic process
GO:1901615	P	organic hydroxy compound metabolic process
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15639	CYP734A1, BAS1; PHYB activation tagged suppressor 1	EC:1.14.-.-	Brassinosteroid biosynthesis	ko00905

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network