Detail information of g400702


Location
GeneChrStartEndStrand
g400702Scaffold_76784:HRSCAF_459870306072323780-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020575326.14.5e-294probable LRR receptor-like serine/threonine-protein kinase At1g06840
SwissprotC0LGD7.28.9e-223Probable LRR receptor-like serine/threonine-protein kinase At1g06840
trEMBLA0A5P1EDD33.3e-291Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G06840.164.130.01172Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag200000.t1; g390688.t1; g400702.t1; g538117.t1
Allium fistulosumAfisC2G06953; AfisC8G01863
Allium sativumAsa0G05573.1; Asa1G03306.1; Asa1G03309.1; Asa3G00146.1
Arabidopsis thalianaAT1G06840.1
Oryza sativaLOC_Os01g60280.1; LOC_Os01g72990.1; LOC_Os01g72990.2; LOC_Os05g40270.1; LOC_Os05g40270.10; LOC_Os05g40270.2; LOC_Os05g40270.3; LOC_Os05g40270.4; LOC_Os05g40270.5; LOC_Os05g40270.6; LOC_Os05g40270.7; LOC_Os05g40270.8; LOC_Os05g40270.9

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08263.9LRRNT_2Family7911728.61.2e-06
PF13855.3LRR_8Repeat19925931.31.1e-07
PF13855.3LRR_8Repeat32037829.63.8e-07
PF00069.22PkinaseDomain665929162.21.4e-47

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005575Ccellular_component
GO:0016020Cmembrane
GO:0005623Ccell
GO:0044464Ccell part
GO:0071944Ccell periphery

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04730IRAK1; interleukin-1 receptor-associated kinase 1EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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