result

Gene information

Detail information of g40100

Location

Gene	Chr	Start	End	Strand
g40100	CHR2	131368019	131369539	+

Sequences

CDS

>g40100.t1
ATGCCCCGCCCTTTCTCTCTCTTCACTTGTCTCCTCTCACTTATTTTCCTCCTTTCTTCCGACGCCTCCGACTCCGACCATCTTATCCGCTTCAAGACGTCTTTGCCGAATCCTACCGTCCTACCCACGTGGGACACCCGCACTCCAGTATGCTCCTTCCACGGCGTCGCCTGCTCCTTCGACGGCTTCGTCACTGCAGTCGATCTCACCGGTGTTCAGCTTAGAACCTCCTTCAGCTACATCTCCGCCACTCTCCTTTCCATTCCGACACTCAGCGACCTTCGCTTGGGCTCTGCAAACATCACCGGTAACCTCACCGCAGCATCTTCCTGCCACCTTACCTCTTTGGACGTTTCCGAAAATGCCATCGCTGGCTCGTTCTCTGATGTTGTGGGGTTCATAACGTCTTGCGGTTCTTTGGCTGCTTTAAACGCTTCCACGAATTTGATCGGAGGTGAGGTTACCCCTGCCGCAGGCGGTGATTTCAACTGCTCGAGTGTTGAGAACCTCGATTTATCTAGGAACCGTTTGTATGGCGTAATGAAAGAAGGGGTTTTCAATAATTGTGCTAACTTGAAGTATCTGAATTTATCCTCTAACCAATTTGTTGGAAGTTTGCCTGAAGATTTGAATTTGAATTACCTGGAGACAATCAATCTATCAAATAACAGTTTTTCTGGAGAAGTTTTTGATGGGGTTTTGTATACAAAGAGTTTGAAGGAGATTCAGCTTTCATTTAACAGATTTAGCGGGGATATTGCTGACAAGGACTTGAACTTTCCAAATTTGGAGTTACTTGATCTGAGCTCAAACAATTTTTCAGGTTTCATACACAAAAATCTATGCAGTGTTTCAAGCAAGTTAAAAGAATTGTATCTGCAAAACAATTTGTTCAGAGGAAGAATTCCTGATAACCTTAGCAATTGTTCCATCTTATTCTCCCTTGATTTAAGTTTCAATTACCTTCATGGACCGATACCAGAATCTTTTGGAGCTTTAACTCAACTCAAAGATTTGATACTGTGGCAGAATTACTTGGAAGGAGAAATCCCAAAAGATCTCAAGCTTCTGTCCTCTCTAGAGAATTTGATCCTTGATAATAATGGGTTAACGGGTCCAATACCAAACGGGCTTCGTAACTGTTCAAATTTGAATTGGATATCCTTATCAAGCAATCGTATGAGTGGTGAGATACCTTCATGGATTGGTAAGCTGGAGAAACTCGCTATTCTCAAACTGAGCAACAATTCATTTTTCGGTTCCATACCAAAAGAGCTTGGAGATTGTAAGAGTTTAATATGGTTAGACCTCAATAGTAACAATTTGAGTGGTAAGATACCAAACACATTAGCAAAACAATCGGGCAAAATAGCGGTTGGTTTGGTTACTGGCAAAGAATATGTGTACTTAAAGAGTGATGGGAGTAGCATGTGTCGTGGTTCCGGAAATTTGCTAGAGTTTGCCGGAATCCGCTCTGATGAACTGGATAGATTACCCAGTAGGCAGTCTTGCAACTTTAGTAGAATATATAAAGGGAGCACTAAGTACACATTCAACGACAATGGCTCGTTGATATTTCTTGATTTGTCTTATAACCATTTGGAGGGTGAGATACCAAATGAGATCGGAGATATGTCTTATCTAGCTGTTCTTAACCTCGGGCATAATTTATTATCGGGTACGATTCCGGAAGGTTTAGGAAATCTGCATTATGTGGGGGTATTCGATTTGTCTCATAACTTTCTTGAAGGAAACATCCCGAATTCTTTTTCGAGGTTAACATCTTTAACGGAGATCGATCTTTCAAATAACAAGCTTAATGGTACGATCCCCGAATCGGGTCAGTTAGGCACTTTTCCTAGCTATAGGTATGAGAACAACTCTGGTCTTTGCGGGTTTCCTTTACCTGCTTGCGTAAATAATCCGCTACCCGGTGTGAATGAAGAACATCAAATGTCTAAACGTCGCCAAGCATCTATTGTTGCTAGTGTCTCCTTGGTTCTCCTAATTATTGTTTTGTCTGTTTTTTGCACATTCATATACATCATCGAGAGCAAAAAGAGAAAGAAGAAGAAGAGTAGCAATAGCAGGGATATATACATAGACAGCCGTTCTCATTCAGGCACTGCTAACGGCAATTGGAAGCTAACAGATGCCGAGGAAGCCCTAAGCATCAGCCTAGCCACATTCGACCAGAAACCTCTGCAGAAGATCACATTTGCAGACCTTCTAGAAGCGACCAATGGTTTCCGCAGCGACAGTCTAGTAGGCTCCGGAGGCTTCGGTGACGTGTACAAAGCGCAGCTTAAAGACGGCAATGTGGTTGCCATAAAGAAACTGATACACATAAGCAATCAAGGAGACAGAGAATTCATGGCAGAAATGGAAACAATAGGCAAGATCAAGCACAGAAACCTCGTGCCTCTACTCGGGTACTGCAAAGTTGGAGATGAAAGGCTTCTAGTGTACGAATATATGAAGTATGGAAGCCTCGAGGATGTTTTACAAGACCGTAAAAAACTGGGACTGAAGCTAAACTGGGCCGCAAGAAGAAAGATAGCAATAGGAGCAGCCAGAGGATTAGCATTTTTACATCACAACTGCTTTCCTCACATAATTCATAGAGACATGAAGTCTAGCAACGTGTTATTGGATGAGAATTTGGAGGCTAGGGTTTCTGATTTTGGGATGGCGAGAATGATGAGTGCAGTGGATACCCATTTAAGTGTTTCAACCTTAGCAGGTACACCCGGTTATGTACCACCCGAGTATTATCAAAGCTTTAGATGCACCACTAAAGGGGATGTATATAGCTATGGTGTGGTTTTGCTTGAGTTGCTAACGGGTAGGCAACCGACAGATTCTTCTGATTTTGGTGATAATAACTTAGTTGGGTGGGTGAAGCAGCACTCAAAGTTCAAAATTAGCGACGTTTTTGATAGAGAGCTCATGAAAGAGGATCCGGGTTTGGAGCTTGAGCTGCTTCAGCATTTAAAAATTGCTTGTGCTTGTTTAGATGATAGGCCTATGAGAAGGCCCACCATGGTCAAAGTTATGGCCATGTTTAAGGAGATTCAGGCTGGTTCCACTGTGGATTCATCGGGTACTGATATTGCAGGTTCGGTCGTGGATGGAAGCTTCTCGACTTCTGATATGAGCTTGAGGGAGAGCAAAGAAGAGAGGGATAATTGA

Protein

>g40100.t1
MPRPFSLFTCLLSLIFLLSSDASDSDHLIRFKTSLPNPTVLPTWDTRTPVCSFHGVACSFDGFVTAVDLTGVQLRTSFSYISATLLSIPTLSDLRLGSANITGNLTAASSCHLTSLDVSENAIAGSFSDVVGFITSCGSLAALNASTNLIGGEVTPAAGGDFNCSSVENLDLSRNRLYGVMKEGVFNNCANLKYLNLSSNQFVGSLPEDLNLNYLETINLSNNSFSGEVFDGVLYTKSLKEIQLSFNRFSGDIADKDLNFPNLELLDLSSNNFSGFIHKNLCSVSSKLKELYLQNNLFRGRIPDNLSNCSILFSLDLSFNYLHGPIPESFGALTQLKDLILWQNYLEGEIPKDLKLLSSLENLILDNNGLTGPIPNGLRNCSNLNWISLSSNRMSGEIPSWIGKLEKLAILKLSNNSFFGSIPKELGDCKSLIWLDLNSNNLSGKIPNTLAKQSGKIAVGLVTGKEYVYLKSDGSSMCRGSGNLLEFAGIRSDELDRLPSRQSCNFSRIYKGSTKYTFNDNGSLIFLDLSYNHLEGEIPNEIGDMSYLAVLNLGHNLLSGTIPEGLGNLHYVGVFDLSHNFLEGNIPNSFSRLTSLTEIDLSNNKLNGTIPESGQLGTFPSYRYENNSGLCGFPLPACVNNPLPGVNEEHQMSKRRQASIVASVSLVLLIIVLSVFCTFIYIIESKKRKKKKSSNSRDIYIDSRSHSGTANGNWKLTDAEEALSISLATFDQKPLQKITFADLLEATNGFRSDSLVGSGGFGDVYKAQLKDGNVVAIKKLIHISNQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEYMKYGSLEDVLQDRKKLGLKLNWAARRKIAIGAARGLAFLHHNCFPHIIHRDMKSSNVLLDENLEARVSDFGMARMMSAVDTHLSVSTLAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGRQPTDSSDFGDNNLVGWVKQHSKFKISDVFDRELMKEDPGLELELLQHLKIACACLDDRPMRRPTMVKVMAMFKEIQAGSTVDSSGTDIAGSVVDGSFSTSDMSLRESKEERDN*

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	ONK80825.1	3.4e-223	uncharacterized protein A4U43_C01F22190
Swissprot	Q8GUQ5.1	2.6e-204	tBRI1
trEMBL	A0A5P1FR85	2.4e-223	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G39400.1	54.85	0.0	1148	ATBRI1;BIN1;BRI1;CBB2;DWF2	Leucine-rich receptor-like protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g40100	AT4G39400.1	1165	389	19	27	1061	38	1195	54.85	0.0	1148
g40100	AT1G55610.2	1008	451	17	64	1034	153	1146	50.20	0.0	952
g40100	AT1G55610.2	422	212	14	263	628	127	534	33.18	1e-29	129

Ortholog group

Species	Genes
Allium cepa	g40100.t1
Allium fistulosum	AfisC7G02957
Allium sativum	Asa3G02479.1
Arabidopsis thaliana	AT4G39400.1
Oryza sativa	LOC_Os01g52050.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF08263.9	LRRNT_2	Family	22	59	30.3	3.3e-07
PF00560.30	LRR_1	Repeat	287	309	10.6	0.64
PF13855.3	LRR_8	Repeat	547	606	31.9	7.5e-08
PF00069.22	Pkinase	Domain	752	1020	160.5	4.5e-47

Gene Ontology

Accession	Ontology	Name
GO:0007017	P	microtubule-based process
GO:0000226	P	microtubule cytoskeleton organization
GO:0001578	P	microtubule bundle formation
GO:0007010	P	cytoskeleton organization
GO:0007165	P	signal transduction
GO:0006996	P	organelle organization
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0009314	P	response to radiation
GO:0009416	P	response to light stimulus
GO:0009593	P	detection of chemical stimulus
GO:0009628	P	response to abiotic stimulus
GO:0009642	P	response to light intensity
GO:0009646	P	response to absence of light
GO:0009647	P	skotomorphogenesis
GO:0009719	P	response to endogenous stimulus
GO:0009720	P	detection of hormone stimulus
GO:0009725	P	response to hormone
GO:0009726	P	detection of endogenous stimulus
GO:0009729	P	detection of brassinosteroid stimulus
GO:0009741	P	response to brassinosteroid
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0009755	P	hormone-mediated signaling pathway
GO:0009791	P	post-embryonic development
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0014070	P	response to organic cyclic compound
GO:0016043	P	cellular component organization
GO:0023052	P	signaling
GO:0070887	P	cellular response to chemical stimulus
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032870	P	cellular response to hormone stimulus
GO:0033993	P	response to lipid
GO:0042221	P	response to chemical
GO:0043401	P	steroid hormone mediated signaling pathway
GO:0048545	P	response to steroid hormone
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051606	P	detection of stimulus
GO:0051716	P	cellular response to stimulus
GO:0065007	P	biological regulation
GO:0071310	P	cellular response to organic substance
GO:0071367	P	cellular response to brassinosteroid stimulus
GO:0071383	P	cellular response to steroid hormone stimulus
GO:0071396	P	cellular response to lipid
GO:0071407	P	cellular response to organic cyclic compound
GO:0071495	P	cellular response to endogenous stimulus
GO:0071840	P	cellular component organization or biogenesis
GO:1901700	P	response to oxygen-containing compound
GO:1901701	P	cellular response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13415	BRI1; protein brassinosteroid insensitive 1	EC:2.7.10.1 2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network