result

Gene information

Detail information of g403410


Location
GeneChrStartEndStrand
g403410Scaffold_77168:HRSCAF_4602548207582578-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_026421821.11.1e-11transcriptional regulator SUPERMAN-like
SwissprotQ9SR34.13.6e-07Protein TELOMERASE ACTIVATOR1
trEMBLA0A2I0W5D82.3e-11Transcriptional regulator TAC1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G17810.134.162e-1268.6C2H2 and C2HC zinc fingers superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag403410.t1
Allium fistulosumAfisC7G03991
Allium sativumAsa3G01795.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain285123.92.6e-05

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0008150Pbiological_process
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0043085Ppositive regulation of catalytic activity
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044093Ppositive regulation of molecular function
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050790Pregulation of catalytic activity
GO:0050794Pregulation of cellular process
GO:0051052Pregulation of DNA metabolic process
GO:0051054Ppositive regulation of DNA metabolic process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051338Pregulation of transferase activity
GO:0051347Ppositive regulation of transferase activity
GO:0051972Pregulation of telomerase activity
GO:0051973Ppositive regulation of telomerase activity
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0065009Pregulation of molecular function
GO:0080090Pregulation of primary metabolic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000278Pregulation of DNA biosynthetic process
GO:2000573Ppositive regulation of DNA biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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