result

Gene information

Detail information of g404311

Location

Gene	Chr	Start	End	Strand
g404311	CHR7	160308672	160313048	-

Sequences

CDS

>g404311.t1
ATGCGCATATTGGCTCAGAAGAAACATCAATCAAATGAACAGCCAAATGTAATACTTGCACAAAATATTTCTGTTCCATATGAAGAGGAAGAAAAAAAAGTGATGCACACACCACGGATTTTGAGAGGGGATGTAGACAGAACATCCAAATTGATGAGAGGCGGAGGAGTACGGATTCAGACAGGGAGGTATGGTGGGAGATCGAATCCGGGAAATGATCCCCATTCAAACATTCATCTGCTCATTTTCCACATTCAAGAAAGAAAAAAAATGCAGTTCTCACCTTATCCTTTGCTTTTCTTCATCTTCCTAAACATACCATTTCTCCCTTCTTCCTCGAAGCCAGACCCAGCATCTTCTGGATACAAAAATTGTGCGCCTCAACCATATACATGCGGCGACACAAATTTCACTATCTCATATCCATTCCATATAGATTCCCGTCCCAGCTACTGTGGCAATCCAGACTACTTCATCAACTGCACAAACAATAACGCAACTCTAGCCATCACAATCTCCAACCAACAACAGTATAAAATCACTGACATCGACTACGACAACAATCTTGTGAACATAGTCAATGAAGACTTCGTATCGGACATAGGCTGCCCTCGAGCTTTTACCAATACTACTATCAACACCAACTTGTTCCAGTATTCTCAGCGCGACCGGAACTTGACTGTTTATATCAACTGCAGCACACTTCTGATCATTCCAGTGATAGTAAATTATGCATGTTTAGATTTTAGTGGCCAATCATACTATAGGTTGGATAATGGAACTTTGGATGATTTGCTCGGGAAGTGTAGTTCTATAATTAATGTGCCATTGGGTCAAGAAACTGCTTATAATTTGATTAATGGGAGGTTGCAGTTTAGACAGGCTTTGCAGCAGGGTTTTACTTTACAGTGGACTGCCGGTTCTGATTGGTGCGGTACTTGTGTGAATTCTGGAGGGTATTGTGGGTATAATTCCTCTGATATTTATCAGCATCTCTGTTTTTGTTCTAATGGAACTTCAATCGATTCTTGTGATTCTCTAGATGGTGGAACTCATACTACCAGAAATATTGTGATAGGTGTAGCATGTGGATTTGGCGGCTTCTTCTTAGCATGTGCAGGTAGCTTTTACATCTATAGGCATAAACTGAAGAAACATAAGGATACAGCTATGATTCCAAAGCAAAGTGTGTATTCTAAGTCATCTTCTGACAAAGACAAAGAATCAATCAGTTTTAATTGCAATACTCCTCTTTTCTCTTACGAAGAGCTTGTAGAGGCAACAAATGGCTTTGAAGCATCTAGAGAACTTGGTGATGGTGGATATGGAACTGTATACAAAGGTATTCTCAAAGATGGACGAGTAGTGGCCGTAAAGCGCCTATATGAAACAAGCTACAAGCGAGTCGAGCAATTCATGAATGAAGTGGAAATCCTCTCGGGCCTCCGCCACCCTAATCTAGTCACACTATATGGATCTACTTCTCCTAATTCTCCCCACCTACTTTTAGTTTACGAATTTATCCCTAATGGAACATTAGCGGACCATCTCCACAACCCAACCCGCTCCAAATCTCTCTCATTATGCCTTCGCCTAAAAATGGCTATTGACACTGCTGCTTCACTCTCCTATCTTCATTCTATTGACATCATTCACCGTGATGTTAAATCCAACAATATACTAGTTGACAATAATTTCAACATTAAAGTAGCCGATTTTGGACTATCTCGTCTTTTCCCTCCAAATAGAACACATGTATCTACTGCACCTCAAGGAACACCAGGTTATTTAGACCCTGAGTATCATAGGTTTTACCAACTTACTGATAAGAGCGATGTTTACAGTTTCGGAGTTGTTTTGATGGAATTGATATCATCTAGACCGGCTGTAGATATTGATCGAAAACCAAATGAGATTAGTTTGGCAATGGCTGCGGTTAATAAGATACAAAAAGGCGAGCTGAGTGACTTGATCGATCCTTATCTCAGATTTAATTCAAATCAAGAAGCGAATAGAATCATCACACAGATTGCTGAGTTGGCGTTCAGATGCTTGCAAATGGATAGAGAGATGAGACCATCTATAAAAGAAGTGTTGAAAGGATTGAAAGAAATTGAAGAAGGTGCTCATTTTGCTTATGAAGCCGATTGCTACGAGAAGAAAATGAGAGAAGAGGCAACTTTGTTGAACAAATCAGGGCCTGGTTCACCTGATACTGTCTCATGTACATGGACAAGTAGGTCGACAACTCCAAGCGCAAGTAATTAG

Protein

Gene

>g404311.t1
ATGCGCATATTGGCTCAGAAGAAACATCAATCAAATGAACAGCCAAATGTAATACTTGCACAAAATATTTCTGTTCCATATGAAGAGGAAGAAAAAAAAGTGATGCACACACCACGGATTTTGAGAGGGGATGTAGACAGAACATCCAAATTGATGAGTATTCCATAAAAAAAAAGAGGTTTGTGATGCCGATTTCTTACTTAAAGCATCCATAGTTCATTGATTTGTTGAAGGAGGCGGAGGAGTACGGATTCAGACAGGGAGGTATGGTGGGAGATCGAATCCGGGGTGGGATCGAATTGGGGACGAACGAATGGAATTGGCGACTTTTTTTAGGCGAATCCAGGGATAAACAAAATTAGGTTTTTGAAGAGTAATATGAGAACGGAGGTTATAAGTGCGGGTTAGACCGAAAGAATGCAGATGTGGAAAATGGAGGGCATTTTTGAAAGTTCAGAAAGACACCGAGTAATTTAGTTGAATGAATTATCTTTATTAGTAGTAGAGATTAATCTGGAAGGCTGGAAGTATGTAAACCGAGATGCATTTTAGGTGAAGATCGCTTTCATAGTTAGGGTGACTCATTCTCCAAAAATTATTAGGCTATCAACTATCTTTTGTCTGTGCTTATTCAACATTGTTTGAACACATCTTCGTTCAACCAAATGTTTCTGAACGATTGACTAAACTGCTTTGAAACGTTTGGTTCCTGATTAAAAAGCGTTTAATTATGCATGATTGAAATATCAAACACGCAACTCACATATTAAACATTCACCAAACACAATTATACAGATAAGTCCAACATAATGTCATTTTTGCATAGGCATTTAAAAGTATTACACTGTTGGAAAATTTAATAAGATGATTGACCGACTAATTTACACGAAATTACTGCAAATGACAAAAATTTTCAGCATTTTAACCTCAATAACAGACCTTCGGTATTTTAGTCTAAATGACAACTTTCTTTAGGTATCAATTTTTAGTTATTGATGACATTTTTTATGTATCAGTTTGTAGTTATCGGTACCAGTTTTCAGTTCGATAGCAGTTTTGAAATAATGTTTATCCTTATGCATAATTTTAAAAAAATGTTTGTTCTTGTTGTTAAAATATTGAGGTCATGTCCTTGAGGCTAAAAATATATGAATTTTTGTCCTTTAAATTAATTCCTCCGCTAATTTATACTCTCAAATTTACAATGTATTTGCACATAAAACTGTTACTTTAGGACATGATGACACCAAAGAAGAAAACGGAAATTGGCGTTCTATGACTATATAGGCACACATGTAGGTCCTAAGAAATTTAACGTTCTGTGAGAATTCAAAGTCTTCAGTGACCTATACGCAAAACAACCAGAGACAAAATTTCCATTGTTAAATCAGAAATGATCCCCATTCAAACATTCATCTGCTCATTTTCCACATTCAAGAAAGAAAAAAAATGCAGTTCTCACCTTATCCTTTGCTTTTCTTCATCTTCCTAAACATACCATTTCTCCCTTCTTCCTCGAAGCCAGACCCAGCATCTTCTGGATACAAAAATTGTGCGCCTCAACCATATACATGCGGCGACACAAATTTCACTATCTCATATCCATTCCATATAGATTCCCGTCCCAGCTACTGTGGCAATCCAGACTACTTCATCAACTGCACAAACAATAACGCAACTCTAGCCATCACAATCTCCAACCAACAACAGTATAAAATCACTGACATCGACTACGACAACAATCTTGTGAACATAGTCAATGAAGACTTCGTATCGGACATAGGCTGCCCTCGAGCTTTTACCAATACTACTATCAACACCAACTTGTTCCAGTATTCTCAGCGCGACCGGAACTTGACTGTTTATATCAACTGCAGCACACTTCTGATCATTCCAGTGATAGTAAATTATGCATGTTTAGATTTTAGTGGCCAATCATACTATAGGTTGGATAATGGAACTTTGGATGATTTGCTCGGGAAGTGTAGTTCTATAATTAATGTGCCATTGGGTCAAGAAACTGCTTATAATTTGATTAATGGGAGGTTGCAGTTTAGACAGGCTTTGCAGCAGGGTTTTACTTTACAGTGGACTGCCGGTTCTGATTGGTGCGGTACTTGTGTGAATTCTGGAGGGTATTGTGGGTATAATTCCTCTGATATTTATCAGCATCTCTGTTTTTGTTCTAATGGAACTTCAATCGATTCTTGTGATTCTCTAGGTATGACCAAAGCATGGATACGCTTCTTCTTTTATTTGGGTTTTGTACTTTCATGATTTTGTTCTGAATATTTTGGTGTAATTGATGTTGCAGATGGTGGAACTCATACTACCAGAAATATTGTGATAGGTAAGGCAATCTTTATCTCTATTTTATAGGGTTTTTGAGTGCATGAAACCGAACAAACTATAGCACAACATCTAATGTACTGTATTGGAGTAAGGTAAATTGACTTCTGCCACTTTGGGGGTATATGTAATATAAACTGAATACTCTTGAAGTTTTAATCAACAAACTAATAATAAGTCATACCTCAGATGTGATTTCAGTAGTTTTCATTGCAATTTGTGTTACTTCCATGATTCTAAACTGCTCCTCTTTTCTTGTATTTGTTGTAATTAGGTGTAGCATGTGGATTTGGCGGCTTCTTCTTAGCATGTGCAGGTAGCTTTTACATCTATAGGCATAAACTGAAGAAACATAAGGATACAGCTATGATTCCAAAGCAAAGTGTGTATTCTAAGTCATCTTCTGACAAAGACAAAGAATCAATCAGTTTTAATTGCAATACTCCTCTTTTCTCTTACGAAGAGCTTGTAGAGGCAACAAATGGCTTTGAAGCATCTAGAGAACTTGGTGATGGTGGATATGGAACTGTATACAAAGGTCTGTTAGTCTGCACAGCAGTTGCAGGTGTATCACTAATACCATGTCCTATAAAATTTCATGCTAGATAGTCTGAGATGCTGAATAAAAAGACAGACGATTTGCGCTAAATCATTTCGATTATAAACTGGAGTAGAAATAACTCAATATTTGAGACAAGCAATATAGTAACAATGCAAAATTGTAGTTTTTCCAAGGAAAAGATTATCAGATGACACATACTGCGTGTATCTGTGCATACATGTATGTGCATGCACTAGTTTATGTGTATGTATATGCCTATCCAGCCATGTGTTTACTTGTACAAGCCTGAATATGTGTGTTGTGCATAGCTAAGTGTATGTCATGTGTCATAGACAGTATGTTAGGAACGTCATACATGTTGAACGATATTATGCTCCAAAATCGAAGGAGTTGATATTATGGAGCTCACCATAACAGTTTCACTGTACAAAAGTGATACTTTTTTGTTATTATAATGGCCATTAAAGAACCTTACTATATTTCAAACAAATTTAGTAGTGAATTTTAATTAAATTACTATTTAACATCTACAAATTTCAGGTATTCTCAAAGATGGACGAGTAGTGGCCGTAAAGCGCCTATATGAAACAAGCTACAAGCGAGTCGAGCAATTCATGAATGAAGTGGAAATCCTCTCGGGCCTCCGCCACCCTAATCTAGTCACACTATATGGATCTACTTCTCCTAATTCTCCCCACCTACTTTTAGTTTACGAATTTATCCCTAATGGAACATTAGCGGACCATCTCCACAACCCAACCCGCTCCAAATCTCTCTCATTATGCCTTCGCCTAAAAATGGCTATTGACACTGCTGCTTCACTCTCCTATCTTCATTCTATTGACATCATTCACCGTGATGTTAAATCCAACAATATACTAGTTGACAATAATTTCAACATTAAAGTAGCCGATTTTGGACTATCTCGTCTTTTCCCTCCAAATAGAACACATGTATCTACTGCACCTCAAGGAACACCAGGTTATTTAGACCCTGAGTATCATAGGTTTTACCAACTTACTGATAAGAGCGATGTTTACAGTTTCGGAGTTGTTTTGATGGAATTGATATCATCTAGACCGGCTGTAGATATTGATCGAAAACCAAATGAGATTAGTTTGGCAATGGCTGCGGTTAATAAGATACAAAAAGGCGAGCTGAGTGACTTGATCGATCCTTATCTCAGATTTAATTCAAATCAAGAAGCGAATAGAATCATCACACAGATTGCTGAGTTGGCGTTCAGATGCTTGCAAATGGATAGAGAGATGAGACCATCTATAAAAGAAGTGTTGAAAGGATTGAAAGAAATTGAAGAAGGTGCTCATTTTGCTTATGAAGCCGATTGCTACGAGAAGAAAATGAGAGAAGAGGCAACTTTGTTGAACAAATCAGGGCCTGGTTCACCTGATACTGTCTCATGTACATGGACAAGTAGGTCGACAACTCCAAGCGCAAGTAATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020265630.1	2.7e-190	LOW QUALITY PROTEIN: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2
Swissprot	P0C5E2.3	9.1e-127	Probable receptor-like serine/threonine-protein kinase LRK10L-1.2
trEMBL	A0A8B7MVV4	2.2e-186	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform X6

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G18390.2	42.75	8e-134	474		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g404311	AT1G18390.2	676	332	23	96	747	10	654	42.75	8e-134	474
g404311	AT1G18390.1	654	331	16	118	747	24	648	41.28	3e-129	459
g404311	AT5G38210.1	650	321	19	96	707	15	635	40.31	1e-115	414

Ortholog group

Species	Genes
Allium cepa	g404311.t1
Allium fistulosum	AfisC7G01516
Allium sativum	Asa3G03630.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	129	234	33.8	4.3e-08
PF14380.3	WAK_assoc	Domain	262	338	56.2	4.4e-15
PF00069.22	Pkinase	Domain	431	700	171.9	1.5e-50

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network