result

Gene information

Detail information of g409795

Location

Gene	Chr	Start	End	Strand
g409795	CHR1	342631898	342633838	-

Sequences

CDS

Protein

Gene

>g409795.t1
ATGAATGAACTTCTAACCCTAGAAGATTCGTTCGATCTTGACCACAGTTTCACCAGCAGCACGGCGTCCGCTTCCACATTCGCTTCTGCGTCCACGTCCAGTGCCCGGAGCAGCCTTAGCCTCAGTCTCCCTTCCTTCTCCGCGTCCACGTCGCTGATAAACCCTCACCCGCATTCCAAGTTCAATTCCAGGTCGCATTGGGAGGCCATCAGGGCCGCTGCCAACTTGTCCAAGGATGGGGTTTTCCATCTGAGGCATTTGCAGCTTTTGAACCATCTCGGATCTGGTCATCTCGCTAGGGTTTTCCGTTGTCGAATTAAGGGATCCGATGATTTAGGGTTCGCGCTTAAGGTCATCGACTTGGAAGCTGCAGGTACACTTCAATTTTCTTACATTTTTACTATCGATGAAAAATGTCCGTACTAAAATCCCAAATTCGAAGCATGACAATCGTTTTGAATAAATGTACCTCACACCAGAAGTTTAGGACCAATGGATAAGTTTAGCTTTATGATTTGCATATGATTAGTGTACAGTAGGCTACAAGTTAATCAACACCGTAAATAATAATATGAACATTTTTATTCAAATGAGATCCTTATGGCTGGTGCACTTCTGCTCTGATTCTTTGCAGAGCAGTGAACCTTATACGTAGAGGTAACATTTTCAGACTAAAATCACACATGTAAATTACACTAACAAGATGATCAACGACATTAAAAGTGTAAGACATAGACTAATAGCTCTATTATTTGAAAAAACACAGGGAAATTCTCGCATGTAAGAACGGAAGCTGAAGTGCTATCGGCCTTAGACCACCCGTTTCTACCGACTCTTTACGCTCGCATGGATGCCTCTCACTATGCTTGCTTTCTAATTGATTACTGCCCTGGAGGAGACCTTCACTCCCTTCTTGTAAGACACCCCTCCCATAAACTCCCTTTATCCGTAGTTCGATTCTTCGCATCCGAAGTCCTCCTTGCCTTGGAGTACCTCCATGCCCTCGGCTTCGTATATCGTGATCTCAAACCCGAGAATGTGCTTATTCGTTCTGATGGACACATTATGTTGTCTGACTTCGATCTCTGCTTCTCCTCCAAGGTTAAACCACGTCTCTACCAGAGGTACAATTGCAGAACCACTTATCACAAAACCATTTATATTTCTATGTTATATCATAGTTAATTCATCATGTTGATATTTTTTTTTGTACAATCTTGTGAAAAAATTACCCGGAGTATGTATTATGGATTTAATGCACACTTTCTCAGAACTTGATTTTCATATATTCAAAAAATGATAACGTGTTATCCATTATGTCAATTGTCCTGATGTGAGACTATTCTCCTCAGATGCGGAGATTTAGAGTTTGTGGCAGAGCCAGAGGATGCATATTCACGAGCGTGTGTAGGGACTCACGAGTACTTGGCACCTGAAATAGTGAGCGGAGGAGGGCATGGTAATGGAGTGGATTGGTGGGCATTTGGAATATTTCTATACGAGCTTGTTTACGGTAGGACACCTTTTAAGGGATCAAGCAAAGAATCGACTTTAAAGAATATCATGAAACGCGAATTAAGGTTTCCCGATGAAAGCAACGATGCAAATGCTACAATTCGAGATCTAATAAAGAAGCTATTGGTGAAAGACGTAAAAGGTCGAATGGGAAGCAAAAGAGGAGCGTCCGAAATCAAAAGGCACCAGTTTTTCGAAGGGGTAAAATGGGGACTGGTGAGAAGTACAAAATCACCAGTGGTGGTGGGACCCGAGGGTGCGGTGGTGGTGAGGGGGGTGGAGAAGAAAAGAGGGTGGTGGAGTAAGGTTAAAGGGGGTAGTTTGGGAAGTTTGGGTAAAAGTATTTGGTGTAAAAGAGGCGTTAAGTTTGGGTTCATGAGTTATAGTTACAAGAAGTTGAGTTGCAAGAAGGTCAAGAAGCTGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020676897.1	1.9e-135	serine/threonine-protein kinase WAG1
Swissprot	Q9C8M5.1	3.3e-113	Protein kinase 3
trEMBL	A0A2I0W4L0	1.4e-135	Protein kinase PINOID

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G53700.1	51.83	1e-113	407	PK3AT;WAG1	WAG 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g409795	AT1G53700.1	438	158	10	12	399	11	445	51.83	1e-113	407
g409795	AT3G14370.1	407	139	8	12	380	12	413	55.28	4e-113	405
g409795	AT2G34650.1	405	173	10	23	379	10	410	44.44	2e-86	316

Ortholog group

Species	Genes
Allium cepa	g409795.t1
Allium fistulosum	AfisC1G00068
Allium sativum	Asa7G00547.1
Arabidopsis thaliana	AT1G53700.1; AT3G14370.1
Oryza sativa	LOC_Os03g14840.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	89	363	179.0	9.8e-53

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005886	C	plasma membrane
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006810	P	transport
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0009790	P	embryo development
GO:0008150	P	biological_process
GO:0009791	P	post-embryonic development
GO:0009793	P	embryo development ending in seed dormancy
GO:0009914	P	hormone transport
GO:0009926	P	auxin polar transport
GO:0009987	P	cellular process
GO:0010154	P	fruit development
GO:0010817	P	regulation of hormone levels
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0022414	P	reproductive process
GO:0023052	P	signaling
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048316	P	seed development
GO:0048366	P	leaf development
GO:0048367	P	shoot system development
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048825	P	cotyledon development
GO:0048827	P	phyllome development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051179	P	localization
GO:0051234	P	establishment of localization
GO:0051716	P	cellular response to stimulus
GO:0060918	P	auxin transport
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:0099402	P	plant organ development
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network