result

Gene information

Detail information of g409966

Location

Gene	Chr	Start	End	Strand
g409966	Scaffold_77943:HRSCAF_461029	1700607	1708312	+

Sequences

CDS

Protein

>g409966.t1
MAQIMKQLKTFYTFLVPVERGSASRNEDMRSAEANDEEDFTYTTTRCLSSYYSIFVARLAIMIMLAILIGMLTILTWHFTRVYTTNSINSLAYGLRYELLQRPVLRMWNILNSTVEITKAQVKLSEYVIDRYDSPVTQEEQMKLYQMMKDITWAVFASRKALDAITISYTNGFVQAFHRNHRNNATFYIYSDLVVTSYQNLTQQSGTDIQTNVSATWYGEPLDPDTGDKTGNRRRIPPDELINIAGLPEVRDGAASWRIAVSKFSDSPLLSAALPVRHPSNGSIVAVVGVTTALKSVSQLMKELVGIHSGCMYLTTREGNVLATSTDSPLLRNTSVGLKLVMANESDNGIIKSGADWLQKAYGDKFPISHEVHDDNVMLERKNYYIDSFFLNLRRLPLVGVIIIPRKSIMGKVDEIAFTTLVILISLSMCILAIGCICIFILTSGVSKAMRLRAELISHLDARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILTYDGCLTNEQLATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEEVEFDLGRELEGLADMFSVQCINHNVEIILDLADDLPKKVKGDSARVVQIFTNLISNSIKFTLEGHVILRGWLQGMDESNSNVRHKKRSRQDESDEDRDCNRDHKITLWFEVEDTGCGIDSSKWESVFESFEQADPSTTRKHGGTGLGLCIVRNLINKMGGEIKVAKKEGSGTLMRLYMVLGMPDGGTEKHIQAEFKEQGLAVLLALKGSKGRYIISQWLKMKGVFTWEASEWNKLTQILQELFKESSKISENWHLTCLNLNQDGSIKTKSNILIVVDTSLLDQSTNIWNEQLIFLDRYRKKAKFAWILSHNTSNAIKLELQHRGHFLTVNKPLYKTKMINMLGSLLSDGFLEKSPTTEDVHECNEIDPIHFKDISSAESSDNENINDIKNEAEEIVPKTPNGIEKYKTRPKEDKLPESGTCDKICRARYSYNIDTEGIEASRKVTTNRGALDGVYILLAEDNPILQRVATKMLEKMGATVVAVGDGLQAVDALKCMFKEEARRKNNICQQENRVVTMKQSQQPEEFHLILMDCQMPKLDGYEATKAIRRLEAGTGSHIPIIAVTAHAMSSDEAKCLEVGMDAYMTKPLDYNLMVSTILAFTQSNG*

Gene

>g409966.t1
ATGGCGCAGATAATGAAGCAACTGAAAACATTCTATACTTTTCTCGTACCTGTAGAAAGAGGATCAGCATCGAGGAATGAAGATATGAGAAGTGCAGAAGCAAATGATGAAGAGGATTTCACTTACACGACTACCCGCTGTCTCTCTTCTTATTACAGCATATTTGTTGCTCGCCTTGCCATCATGGTTTGAACTTTTCTGAACTCTTTAAATGTGTTCTGCATAATAATAGTCTAAGAGTTACGAGTTAGGAAGAGATGATTAGTAATATACAAGAGAAGATCAATTTTTACACTACTAATATATCAGGTTAGTAAGATTATATCCGTGATGACTGCTTTAGTTACTACGAAATGATTATCTATAGTACAAGAAAATAAATTCTCTTTTGTGGAGACCAGTCGGCCATTTAAACTATTATTTTGGCAAACAAAAGGTAAATGCAAACAGAATAGTATTAAAATAAAATGAATTTTGTTTCACATAATTCTGCGAATGGCTCTATAAGTATATATCCATGCCGAAAACATACAGAAAACATTGGTAGTTAAGATAAAATTTTATGCGGATTAAGAAGACATGTAAAAATCCAGCATTTGCAGATATTTACAACATTATTATGTTACATGCAGATAATGTTGGCCATATTAATTGGGATGTTAACTATACTCACATGGCATTTTACAAGGGTTTACACAACGAACTCCATTAATAGCTTGGCATATGGACTTCGCTACGAGCTTCTTCAACGACCAGTTCTGAGAATGTGGAACATACTGAATTCCACTGTTGAAATAACCAAGGCACAAGTTAAACTTTCCGAATATGTTATTGACCGCTATGATAGTCCTGTAACTCAAGAAGAGCAAATGAAGGTGAGAAGAATAAAGGAACTTTTGTATAACGTCTTTTTTAAGTTTCAAAAAACACAGCCGTCTCTCCTCAAAAACAAATTTTAAAAAACATTACTCTTTGTATTTTCAGACAAAATGCAAATATTTGCATTTTAAACTGTAAATTTGCAGAAAAAATGCAAATTTGGCAAACAATGTAAATATTCGTAGTTTTTTGAAAAGAAAAAAAAATAGTTTTAGTCATAGAAACATGCTATTAAGTTCAGATTCAATTTTCGAAAAAAACGAAACGAAAAATTTACCCAAAATAAAGATAAGGATGTAATTTAAAACATGTTTTTTGACTGGCGTTTTTAACTCTTGACATATTGTAGAGCGTGGAAAATTCATTATGATTATATATATCCTAATGTGGATTTTTAACTCTTGACAGTTGTATCAAATGATGAAAGACATAACATGGGCAGTATTTGCAAGCCGAAAAGCTCTAGATGCTATTACAATAAGTTACACAAATGGATTTGTCCAGGCATTTCATAGAAATCACAGGAACAATGCCACATTCTACATCTATTCCGATTTAGTAGTTACCTCTTATCAGAACTTGACTCAACAAAGGCAAGTTTGCAACAACCCACTCAATTTCAAAAGATTCTATATACAATACATAGAAAGCATACAGCAATTTACCTTTTAATCAATTTACCAAGAATTTCAAAATGGGATTCAAATCAAAAGGTTTAAAGTTTAGATCGAAATTAGATATAGATCGCGTGCATAGATATTAAAAGAATTTGGTTTTTGATAATTAATATGCCTTTATGCTAAAAATTATGCTCGATGTAGGTTAATTATCAAATAGCATTTAAGTACATAAAAGCACTAGCTCTTCTTTTCCTAGTCATATTTCTGTATTTTTGAAATTGATTTGGAAGTTTGAACTTTGAACTTCCACGTCAAAATCTAAAATTTGATTATTCTTCCTGTTTTACCTTTAATTGGTCAAGAAAACAATAAAATTTGAACTGTACACTCAAATAAGTATCTTTATGTTTTTATTTTATTTTACCATAAATGAATGATTTTTTTCTCGACTGCAAGTTCAATTAGGTTTTGAATCGTAATTTGAAAAGCTGCTCATGATTAGAGGGTTTCAATCTGAAACGTGATTCAAAACATAAGATTTTAATATTGTTGATAATAATGCAATTTACCCACTCAGTATGACATTGCTGAATGAAGATACACATTTTTGCTCAGCGCAAAAATAAACATTGTACCCGGCAAACTATTGCAGAGCAGAATATGTGAAGTGTGCTGCTATTGGCATCCAGAAAAATGCCTACGGCTACCATTAAATTTTTATTGCATTTCATTTTTTCTATACTTATGGCCACCAAAATCTATTCTCTCATTCAGCCTTAAACTACCATACATTTCACCTCCATCAAAAAGCTCACATACACTACCTCAAAACATCATCGGAAATCAAAGTTTTCGAATCCTGAAGCACAAAATAAATCTATTTCTTTTTGTCTAATAGATGAAACTAAATGAAGATTCAATGGATGATTCTGATTTTGATGAACACAAAAAGAATAGTTTACTTGTTATTTCTTAAAGTCTACTTTCTTCCACATATCAATCCAATATTTGTTGTAAATGGGTTTTTATGTTATTTTATGACAATTTTAATGGTAAGCATATAAAGTTTGATGATGTTACAATTGAAAGTCTCAGTATAAGTCGTTAAATTTTAATGTTTTATCATACAAAGTTTACGCCATTTTTTCCCTCGTATTTTCTTTTTGGTTTTTTCTTTTAATTATTAGACGGAGTATACCAATCACAATAAAATTTTGAACGCACTTGTTGTTTTGAATAAAAAAATGTTTGATGGTGAAAATATGGAAGAAAACGATTGATCAAATATTTCGAAACAAATGCAGGTTGATTAGATAAACCAATTTTTAATAAATCAAGCAAGTATTTATTTCAAAATTACATAATCCTAAATATTATCAAAAAGTTAATTTTGTTAATTTATTTTTGGTTCTCTTGTTTAGTTATATGATTTTTATTTGAAAAGAGTAAAATTTGGTTTATGGAATAAGAGTGGTAGTAGTTGTGTTTTGAAATATTTGGATGTATGTTTAGTTAAAATAAAATAATAATTGGTGTTAGGAAGTAGAGAACCAAACTTTGTACAGTGGCCTTTAGTTTTGAAAGCCAGAAGCATTTTTCTCGATGCCAACAGTAGCACACGTATGTAAATTGATCAAGGGAAAATTGCAATAAATTTTGAGTGAATATAGAAATAAGCTTTCCAGCGTACTTCAAAGGCTTAGCAAAGTGATAAGTGACACCTGGTATATTTCATACAGTGGCACAGACATTCAGACCAATGTATCAGCTACCTGGTATGGAGAACCACTTGATCCAGACACAGGTGATAAAACAGGAAACCGAAGACGAATTCCACCAGATGAACTGATTAACATAGCAGGTCTTCCAGAAGTTCGAGATGGAGCGGCATCATGGAGGATAGCTGTCAGCAAATTCTCAGACTCTCCACTGCTTTCTGCAGCATTGCCAGTAAGGCACCCTTCTAATGGTAGTATAGTGGCAGTTGTTGGCGTCACAACTGCACTTAAAAGCGTGAGTCAGTTGATGAAAGAATTGGTAGGAATTCATAGTGGATGCATGTATTTGACCACAAGAGAAGGGAACGTACTGGCCACATCAACCGATTCTCCATTGCTAAGAAATACATCGGTAGGTTTGAAGCTTGTGATGGCCAATGAGTCGGATAATGGAATCATAAAGTCAGGAGCAGACTGGCTGCAAAAAGCTTATGGTGATAAGTTTCCCATAAGTCATGAAGTTCATGACGATAATGTTATGTTGGAAAGGAAGAATTATTACATCGACTCATTTTTTCTGAATTTGAGGAGACTCCCCTTGGTATGGTTTCTTCTCTATAATAGTAGTTGTCTAATGAGAAACATTTATACATCCAATATTTTACTCGCCAATATCCATTTCTTCATTGTACCCAATCATTTATCACTCAGCAACACATTGTGGATCCACATTTTCAGCCAGTAATGCTTTACTGGCAAAAAGAAACACTGCAATCAAAGTCACCCAGCAAACAATTGCTGATCAAAGATGGGTAATGGTGAACGTGCGTAATAGTTAGTATAAATATGGTATATGAAATGATGTTTGAGAAATTGAATCTAAGAACAACTAGCACGGCACAGGGTATCTAAAAGTTTATATTTTGTGCAGGTAGGTGTGATTATCATACCAAGGAAATCGATAATGGGAAAGGTGGATGAAATAGCTTTTACAACACTAGTCATACTGATATCACTATCAATGTGTATATTAGCTATTGGTTGCATTTGCATTTTCATATTGACAAGTGGCGTGTCGAAAGCAATGAGACTGAGAGCAGAACTGATCAGTCATTTAGATGCAAGAAGACGAGCAGAGGCATCTAGCAACTACAAAAGTCAATTTCTAGCAAATATGAGGTGAAAATGCTACTACAAAACTCTGTCTATCATGTATGCAAGTGTAAATATTTTATAATCAAACTATATGTTACAGTCATGAGCTGAGAACGCCTATGGCAGCAGTGATAGGTTTGTTAGACATTCTTACATATGATGGCTGTCTCACAAATGAACAGTTAGCAACAGTTACACAGATACGTAAATGTTCAACAGCATTGCTTAGGCTACTCAATAATATTTTGGACCTCAGTAAGGTAGTATATAATTCTATTTTTCTTTTCTTTACCGATAGTTGTGCTACAATACATATATTGAATCCAAAGCTCATAGAGTATAATATGTTGTGCCACTTAAGGTAGAATCTGGAAAATTAGTGCTTGAAGAAGTGGAATTTGATTTAGGGAGGGAACTCGAAGGACTTGCGGATATGTTCTCGGTACAATGCATAAACCACAATGTGGAGATCATACTAGATTTAGCAGGTAAACAATAACGAGACTATTGTGATACAAGTTTGCACTGCTTCTAAATGCAGTAAAACAAAGAAGGGTGGGAAAGGTACCATGACTATGCATGTTCTATAAATTTGAAGAAACTAAATCTTTCTAAATTATACAGACGATCTTCCAAAAAAGGTTAAAGGAGACTCAGCTAGAGTTGTTCAGATATTCACAAATCTCATTAGCAATTCAATCAAGTTTACCCTGGGTAAGTACTTGTTTTTCACATTAGGTACCCAACTATTATTTATGAATGACGCACTAGTGTAACTCATAAGTTCGCATATGATAAGATGTTGCTTTCAATAATATTCAGAAAAGCATGAAAACCAATCTCCAACCTTTAGACATTAAATGATCAAATACTAATATATCGCATTAGACAATAAAGGGATGGCTTTCAAGTTATCGCATAAGCCTTTTGAGGTATTTATTTGTTGTCTGACTGAAATAAAGGGATTAGAACCTGATTCAGTCCTCTAAAAAATTCAGTAGAAATTTCTTTCATGGTTCAATGCACTATGGCTGACTATGTATGCCTAAGAGTTCGATCGAACCCAAGGCCTCTAACAACAACTCGGCGTATTACTACCAATGGTCATTGCGCTGCTGTATGCATTTTAACTTGTTATAGGTAAAATCATCATAATATTCTAAACCATGTCAGAGGGTCATGTTATATTACGCGGATGGTTACAAGGCATGGATGAATCAAACTCAAATGTGAGGCACAAAAAAAGGTCAAGACAGGATGAGAGTGATGAAGATAGAGATTGTAACAGAGATCATAAAATTACTCTTTGGTTTGAAGTAGAAGATACAGGGTGTGGTAAGTCCTTATGGAATGATCTACCATTATCCAAAATAAGCATATCTTGAATTTTAATCAACGTATGTAGGAATCGATTCAAGCAAATGGGAATCAGTATTTGAAAGCTTCGAACAGGCAGATCCATCAACAACGAGAAAGTGAGAAGAGAAACTCCCCTTGTTTTACCCATTTAGTTATATAGTGTATGCTATAACTTATTTAACTGGATGCAGACATGGAGGTACTGGTCTCGGATTATGCATTGTACGGAATTTGGTGAGTTGCTATAAAAACTGATTATAAAATATAATTTTCAAACCTATACTGCTTCTATAAGATTATTTTTCCTGTGATGAAAGATATATGTAATATGCTTAAAAATATATATAAAAACCCCGGTTAGTTACCTTGTCATTTGATGATTATTATAGATTAATAAAATGGGTGGAGAAATAAAAGTTGCAAAGAAGGAAGGTTCGGGAACTCTGATGCGATTATACATGGTGCTTGGAATGCCTGATGGTGGCACTGAGAAACATATTCAAGCAGAATTTAAAGAACAGGGCTTGGCTGTAAGTGAATCTACTTACCATGAGAAATTTCTATGTTATAAAATATAGCTCAAAATTGTGAACATTAAAATGAGGATACAAGTCATATAGGATATTCAATAACTACTAAAAATAGCAGCACGAATCAAAATGCATATGTTTATTTTCTTTTACAGGTGTTACTAGCATTAAAAGGCAGCAAGGGAAGATATATAATATCTCAATGGTTAAAAATGAAGGGAGTCTTTACTTGGGAAGCATCCGAGTGGAATAAATTAACACAAATCCTTCAAGAACTATTCAAAGAGAGCAGTAAAATATCGGAGAATTGGCACTTAACATGTTTAAATCTTAATCAAGATGGAAGTATAAAAACCAAATCAAACATTCTTATTGTTGTCGACACAAGCCTATTAGATCAAAGCACAAACATATGGAATGAACAGTTGATATTCTTGGATCGATACCGTAAAAAAGCAAAATTTGCATGGATATTAAGTCACAATACTTCCAACGCTATCAAACTTGAGCTACAGCATAGGGGACATTTCTTAACGGTAAACAAACCATTATATAAAACAAAGATGATAAATATGTTGGGAAGTCTTTTATCAGATGGATTCTTGGAAAAATCACCTACGACAGAAGATGTGCATGAGTGCAACGAAATCGACCCGATTCATTTTAAAGATATTAGCTCTGCTGAATCTTCTGATAATGAGAATATCAATGATATAAAAAATGAAGCAGAAGAAATTGTACCAAAGACACCAAATGGCATCGAAAAATATAAAACCAGACCAAAAGAAGATAAACTTCCTGAGTCAGGCACTTGTGACAAAATATGTAGAGCACGGTACAGCTACAATATAGATACAGAAGGCATTGAAGCATCGAGAAAAGTGACTACAAACAGAGGGGCTCTTGATGGTGTGTATATCTTGCTAGCAGAAGATAATCCAATTCTGCAAAGAGTTGCAACAAAGATGTTGGAGAAGATGGGGGCTACAGTAGTGGCAGTTGGAGATGGACTACAAGCAGTTGATGCACTGAAATGCATGTTTAAAGAAGAGGCTAGAAGAAAAAATAACATATGTCAGCAAGAAAATAGAGTGGTGACAATGAAACAGTCCCAACAGCCAGAGGAATTTCATCTTATTCTAATGGATTGTCAGGTATATAGCTTTCAATTATTACATATTGATGTATGGTTGAATAAAGTGGTGCCCATAGTAGCTTTTATGATGCAGATGCCAAAGCTCGATGGTTATGAGGCGACAAAAGCTATTAGAAGACTCGAGGCTGGAACTGGTTCGCATATACCAATTATAGCAGTGACTGCGCATGCCATGTCATCTGATGAAGCCAAATGCTTGGAAGTAGGAATGGATGCATATATGACTAAACCACTTGACTACAATCTGATGGTGTCTACCATTCTTGCCTTCACACAAAGCAATGGGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020243509.1	0.0e+00	histidine kinase 1 isoform X2
Swissprot	Q9SXL4.2	0.0e+00	Protein AUTHENTIC HIS-KINASE 1
trEMBL	A0A5P1FNW8	0.0e+00	Histidine kinase 1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G17820.1	57.62	0.0	1321	AHK1;ATHK1;HK1	histidine kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g409966	AT2G17820.1	1187	451	16	3	1149	26	1200	57.62	0.0	1321
g409966	AT2G47430.1	953	523	33	286	1133	222	1108	27.18	9e-67	252
g409966	AT2G01830.1	333	180	4	431	724	408	735	32.73	8e-41	166

Ortholog group

Species	Genes
Allium cepa	g409966.t1
Allium fistulosum	AfisC3G00547
Allium sativum	Asa2G03876.1
Arabidopsis thaliana	AT2G17820.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00512.22	HisKA	Domain	473	538	54.8	6.5e-15
PF02518.23	HATPase_c	Domain	585	723	77.5	9.5e-22
PF00072.21	Response_reg	Domain	1000	1140	67.2	1.2e-18

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004673	F	protein histidine kinase activity
GO:0007165	P	signal transduction
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005911	C	cell-cell junction
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0040007	P	growth
GO:0007154	P	cell communication
GO:0046983	F	protein dimerization activity
GO:0007275	P	multicellular organism development
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0042802	F	identical protein binding
GO:0009506	C	plasmodesma
GO:0009553	P	embryo sac development
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009735	P	response to cytokinin
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009755	P	hormone-mediated signaling pathway
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010087	P	phloem or xylem histogenesis
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0016775	F	phosphotransferase activity, nitrogenous group as acceptor
GO:0018106	P	peptidyl-histidine phosphorylation
GO:0018193	P	peptidyl-amino acid modification
GO:0018202	P	peptidyl-histidine modification
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0070887	P	cellular response to chemical stimulus
GO:0030054	C	cell junction
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032870	P	cellular response to hormone stimulus
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0042803	F	protein homodimerization activity
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0048229	P	gametophyte development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0055044	C	symplast
GO:0065007	P	biological regulation
GO:0071310	P	cellular response to organic substance
GO:0071368	P	cellular response to cytokinin stimulus
GO:0071495	P	cellular response to endogenous stimulus
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:0080117	P	secondary growth
GO:0080190	P	lateral growth
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network