result

Gene information

Detail information of g414846

Location

Gene	Chr	Start	End	Strand
g414846	Scaffold_78499:HRSCAF_461585	492869	496674	-

Sequences

CDS

Protein

Gene

>g414846.t1
ATGTGCGAGGAAGTAGATTTGACGGGAGATGGAGGGGTGCTTAGGAAAATGATCACCAAAGCCAAAGCAGATGCAATCGCGCCCATAGACAATCTTCCACTTGTTGATGGTACTTGTGATGTTATACCCTGTGTTTTCTCTCTATTATTTTTTATCGAAAACTTTGTATTTCCTTAAAAATAAGTATTTCCTTACAAATAAGGAGATGATATCAATAAGTAGGTAAACTATAGTAGCGTCTTCCCAACAACTATATAACTTAAATGGCAAAAATGATCCCAGGCAGAGCATGTGTGAAATACTTTTTAGATTTGCGGTTTTGTCAGAGGATTCCCTTGAAAGGAGCTATTCTCACTAGTAATGCTTTTGGCACAAATATTTGGGGTTGGGTTCTTGAGTGAGCTCAAAGGTGAAAAAGAAATAAAAATAATGCATATTTTCTTATGGTAATCTTTATGTCAACAACTTGTGTGCTCATACATAAGATCACCCCCATTATATCCACTGGTGTAAATTGCACGTACGTGGATCTAATAGCTAGAAATATTTATCTTTTATTTAATTAAAAAATTATGGACTAATGTGTGTTATAAATGCAAAAGTTTTGGCAGTCATGACACTTTTATTTCAAACAAATTGATAGTGAAATTCCATCGATGGTTGGTTGATAAAGGAATGGTAATGGACCGATGGTGAGATTCCATTGATGGATATATGGCAATTTTGGAATTTCGAAAAGACACCGTGGAAATCCTATTCATTAAATTCTTGTTATTAACCAGTGCCAATTCATTCGTTTGGCCAACCGCCAAGCAGTTTAATTGAAGAATGTTACTTTGTTATGTTATAAAATTAAGGATGATAATTGCACAGTTATATCTTTTGTACTCTATTTTGTATTTGGTTTGGTTGACATTGCTAATTATGTTTTCTTTTGTTTTCACTAGTGCTATTTTTGTTGTAGTTCATTATGAAGGAACCCTTGCTGAGACAGGTGAAGTTTTTGATACTACACATGAAGACAATTCAATTTTTTCATTTGAGATTGGAACAGGCTCTGCGGTTAAGGCTTGGGATATTGCCTTGAGAACTATGAAGGTAAATTTCTATTATTTGGTTACATACTAGTTATTCAGCATATTTTTACCTACATAGAATTCAAAGGTTGGAGAGGTAGTGAAAATAACTTGCAAGCCGGAATATGCATATGGAAGTGCTGGGGCACCTCCAGAAATACCCCCAGAGTAAATCCTCAGACCTTTTTCTCCTCGTCTTGTTTTGTGTGCTGAAAGATATAATGCAACTATATTTCTAGAATATTGTTTCAAATTCTTTGTTTACTCTTTGTTTATTCCATATGATTACCTTGAGCAAACAAGAATAATTTCATAACATGTCATTTGTGATTTCAGAATGACTTCGGAGGGGTTTAAAAAATAAAATTGGCTATACATGCTTAATCACTAGTCATAACAACAACCATGTATAGCAATTCATTGATTGGAAAAAGTCTATCAAAAATTTATTTTGATATTTTTCAAATATGCCAGTGAGAATGATGTCAATAATTTGGTCAAAAAATGCAGAGAACAGCACAAATTAGGATACATGAATAATTTGAGTATGTTTTAGATTCGCAGTATTGTTGTCTTATCACACTTACTGTAAAATACAACTGTACAATTTATATTAGTTTTTTGATTAATTTTTTTTCTACAAGGCCATCAAACAATGAATTTCCATTACATATTGCTAATCTGACAACACAAGAGAACACAATAAGAATTTGACTAGCAAGAGAAGAAGAGATTGTTCGATTAGAAACAATCAGATAGAAATAAATATTACTGGTACTGTGACGCTTGAAATACAAATCTATGACATGATTGATTAAGGGTATAGATTTTAGCCTAGAAGAAAAAGGTAAAGAAAGTGAAAGTTACCTTAAAAGTTGTATTAACACTCTCCTAATATTAAAGAATGTCTTTCATTCTTCTTTATTTTTGCAGTTTATTACGGCTTGGATTGGTCAATTAATTTATCTCTTTTATATTTAAAACATAAAAATCCTTCATTCCTTGCACTGTAACTTATCTTTATTTGTTTTGAAAATAAGAATTTTATGTTTAAAAAAGGACCCAAATTATTTTGGAGAATTAACTTGCATTTGGAAACATACTGGAATAATTTGATTGCTTCATATCAAATTAATTCTATGAAAAGTTCATGACTGTGAACAGGAAGGTAATAATTCATATCGTTCATGCGTGATTTACAAATTATTCATTACTAACTAGGACTGCAACTTATTTGTTTCAGTTTACTCAAATAGTTTGCTTGTATAATTCGATTAAATCCTTCTTACTCCCTTAAAAAGGTTTTCAACTCTTATCAACAAGAACTATATGTATTATTTGCTCGTTTATACAAATTTTCTGAAGAATGATGTAATTCCCCTATCCTGTAGTGCTGTTCTTATATTTGAGGTGGAACTGGTGGCATGCAGACCTCGAAAAGGCTCCAGTGTTAGTAGTGTAACTGATGAAAAAGCTCGGCTAGAGTAAGTACTAAGTTCAATAAATTTGTCAAATTTTCAATCCATATAAATTTATGTGTACACAACTGGTACCCAGAATGATTTTTAGCACCAAACATCGCTATCATCACTGCTACTGAAAAGATATTAAAGGGGGATTTTTTTTTAAAAACTTGCTAAAAAGATGATTGAAATAGGGAGCTGAAGAAGCAGAGGGAAATTGCAGCAGCAAACAAAGAAGAGGAGAAAAAGAAGAGAGAAGCAGCAAAAGCAGCAGCAGCTGCTCGAGTTCAAGCAAAAATTAGATGCCAAGAAAAGTCAAGGCAAGGGTAAAGGAAAGGGGAAGTAAACTCTGTTTTGTGTTCGAACGAATAATATTCTAGTTTGAAGAACCATAACGTAACATGCATGATTTCAGCTGATTTGGTGTGTGCTTGGTTTTTTTAATATGTACCTGACTAAGAAAACTAAAAAATCATCTTTGTGGCTATATGATCAGTATGAAAAAAAAACATTATTTTTTTAAAGTGATGATTAAAGTGGTAAAGAGTTCGCATATAGAATCATAAAATGAATTCTATATATCAAACATAATTAGAAATCAATTCACCATTAGTTGCAAGGGAAATATCTAAACAAGTTGAAATTGGAGGGTACACTCTTCCAAAGGTAACAAACTGTGTTTACAAATCATGAAGAAGAAGAAGAAATAATGTAAAATTTTACAATAATGAAATGTTTTATGTCACCAAAGAATAGACGAGAGTATGACAAAGCAACTGAGTAAACTATGTATGTCCTGTAACTTTAGAGTAAACTAGTAAACTTATTAACAAAAAAATTTCTGCTTGAATTGATATTTCAGCCGTGATGCATCATTAAACTGCAGTGAAATAGTCATTAGGATACAAACTGAATACATTGTTGTATTATGCAGGGTACATGGGTCTGGCTAGCATTAGGAGTTTTGGCAAAAGATTCAAAGCAATTTTCAGACCCAGATGCGTTTAGACCAGAGAGATTCGATAAGCAGTGCGATGAACAGAAGAAAAGACATGCATGTTCACACATTCCTTTTGGCATTGGCCCACGTGCATGCATCAGCCAAAAATTTGCTGTACAAGAAGTGAAGCTGGCACTTATTCAACTCTATCAACGGTATACATTTAGGCACTCACCCAATATGGAATCCCCACTTGCTTTTGAATACGGTCTAGTTCTTGGACTTAAGCATGGTGTAAAAGTTAGGGCAATTAAGCGACATGGATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244240.1	2.9e-54	peptidyl-prolyl cis-trans isomerase FKBP20-1-like
Swissprot	Q9M2S7.1	4.7e-49	Rotamase
trEMBL	A0A6G1EGI0	1.8e-53	peptidylprolyl isomerase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G55520.1	67.10	2e-57	218		FKBP-like peptidyl-prolyl cis-trans isomerase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g414846	AT3G55520.1	155	41	1	1	145	1	155	67.10	2e-57	218
g414846	AT2G26170.2	124	48	1	149	267	315	438	57.26	3e-39	158
g414846	AT2G26170.1	124	48	1	149	267	398	521	57.26	4e-39	158

Ortholog group

Species	Genes
Allium cepa	g287311.t1; g290953.t1; g291943.t1; g314199.t1; g377843.t1; g414846.t1; g441480.t1
Allium fistulosum	AfisC2G04229
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00254.25	FKBP_C	Domain	34	108	53.4	2.2e-14
PF00067.19	p450	Domain	160	250	73.0	1.8e-20

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0000413	P	protein peptidyl-prolyl isomerization
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0006457	P	protein folding
GO:0003755	F	peptidyl-prolyl cis-trans isomerase activity
GO:0003824	F	catalytic activity
GO:0005488	F	binding
GO:0005527	F	macrolide binding
GO:0005528	F	FK506 binding
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0006464	P	cellular protein modification process
GO:0006807	P	nitrogen compound metabolic process
GO:0008144	F	drug binding
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016853	F	isomerase activity
GO:0016859	F	cis-trans isomerase activity
GO:0018193	P	peptidyl-amino acid modification
GO:0018208	P	peptidyl-proline modification
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0061077	P	chaperone-mediated protein folding
GO:0071704	P	organic substance metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K01802	E5.2.1.8; peptidylprolyl isomerase	EC:5.2.1.8	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network