Detail information of g415971


Location
GeneChrStartEndStrand
g415971Scaffold_78631:HRSCAF_461717288170288610-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008809838.12.6e-17transcription repressor OFP8-like
SwissprotQ94CV1.12.8e-16OVATE family protein 8
trEMBLA0A835RVN61.7e-18Transcription repressor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G36026.156.062e-1681.3Ovate family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag122742.t1; g278694.t1; g278696.t1; g361838.t1; g376059.t1; g415969.t1; g415971.t1; g532395.t1; g534216.t1
Allium fistulosumAfisC6G01904; AfisC8G01793; AfisC8G03556; AfisC8G03558; AfisC8G03559; AfisC8G03561; AfisC8G03568; AfisC8G03571
Allium sativumAsa0G02367.1; Asa0G02368.1; Asa8G04688.1
Arabidopsis thalianaAT2G36026.1; AT3G52525.1; AT5G19650.1
Oryza sativaLOC_Os01g64430.1; LOC_Os04g37510.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04844.10OvateFamily8213770.67.7e-20

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0008150Pbiological_process
GO:0009966Pregulation of signal transduction
GO:0010646Pregulation of cell communication
GO:0023051Pregulation of signaling
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048583Pregulation of response to stimulus
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0065007Pbiological regulation
GO:1900457Pregulation of brassinosteroid mediated signaling pathway

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.