Detail information of g420305


Location
GeneChrStartEndStrand
g420305Scaffold_79161:HRSCAF_462247343034356012+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020268495.17.0e-113PHD finger protein ING2
SwissprotB3H615.13.5e-101Protein INHIBITOR OF GROWTH 2
trEMBLA0A5P1EW345.1e-113PHD finger protein ING

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G54390.368.852e-98 355ING2PHD finger protein-related

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag420305.t1
Allium fistulosumAfisC2G01451
Allium sativumAsa6G02794.1
Arabidopsis thalianaAT1G54390.1; AT1G54390.2; AT1G54390.3; AT1G54390.4; AT1G54390.5; AT1G54390.6
Oryza sativaLOC_Os03g53700.1; LOC_Os03g53700.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12998.4INGDomain6417259.14.5e-16
PF00628.26PHDDomain25730628.97.2e-07

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0003674Fmolecular_function
GO:0042393Fhistone binding
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0035064Fmethylated histone binding
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0140030
GO:0140034

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11346ING4; inhibitor of growth protein 4EC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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