result

Gene information

Detail information of g422708

Location

Gene	Chr	Start	End	Strand
g422708	Scaffold_79432:HRSCAF_462518	45040	46902	+

Sequences

CDS

>g422708.t1
ATGCTGCCGAATATACTTTTCTTCGTAACCATATTTCTTGTGATTGTACTGGCACAAATTAAAAGAAGAAGAAATCAAAGAAAATACAATCTCCCACCAGGACCAAGAAACCTGCCAATAATCGGAAACCTTCATAATCTCAGTGAGCTTCCACATCGTTCTTTCTACAGATTCTCTCAAAAATATGGACCTCTTGTTTACTTCAAAGTGGGAAGCATCCCCACAATAGTTGCTTCTTCTGTTGAAACTGCAAAAGAGTTCTTGAAAACCAACGATCTCAACTGTTGCAGCCGGCCACTTCTCACCTCAGTTGATAAATTGAGTTATGGCTTGAGCGATGTTGTCTTCATACCTTATGGTCAAGAGTGGAGAGTTCTACGTAAAATCTGCATCCTCCAACTATTCAATATGAAAAAGTTAGCATCATTTCGATCTATCAGAGAAGAAGAGGTTAAAAAGATGGTGAGAAACATATCGGTTTCAAGAGATACAGAGATTAACCTGGAAGAGGAGCTTATGTTGCTTGCCAATAACATTACATGTAGGACTGCATTTGGAAAACAGTATTTGAAAGATGGTGGTGGGGCAAACATACGTAAACTTTTGAAGGAAACACAAGCCTTGTTCATGGCTTTCTTCTATGCTGATTACATACCCATGCTTGGATGGCTGGATGTTGTTAATGGTTCGCATGCTAGGTTACAGAAGAACTTTCTTCAACTGGATGAAATATATCAGCAGGTTATTGATACACATATGAGCAAACAAGATTGTTTTAATAGTGGAAGGGACACTGATGAAGACATTGTTGATTCTCTATTACGTATACAGAGGACTACAAATGAGTTGACGAATGAACAGATTAAGGGAATCCTTATGAATATATTTGTGGCTGGGTCGGATACATCCTCAGCAGCAGTTGAATGGGCAATGACGGAACTTATGAGAAATCCGAAAGCATTGAAAAAAGCACAAGATGAAGTAAGAGGAATGTTCATGAAAAGAGAAGGGAAAATAGAAGAAAGTGAGATAGGCAAGCTTACATATATGAAATGTGTATTAAAGGAGACAATGAGAATGCACCCACCAGTGCCTTTACTAGTTCAAAGAGAGACTATGCAGCATTTCAAGGTCGACGGCTATGATATTCTTCCCAAAACAAGATTGATGATTAACGTGTGGGCAATGGGAAGAGATCCAAATGTTTGGGAGAAGCCTAACGAATTCTGTCCAGAGAGATTTATGGATAGTTCAATTAACTTTTGGGGACATGATTTTGAGTTGATACCATTTGGAGCTGGAAGAAGGATATGTCCAGGAATGCATATGGGAATTGCGGTGGTTGAGATTGCTTTGGCAAATTTACTATATCATTTTGATTGGAAGTTGCCGGAAGGAATGACGAGAGAGGATATCGATATGGATGAGTCTCCGGGAATTACTGTGCATAGAAACTCTCCACTTAAACTCATGGCTGTGCCTGTGAATCATGGAGAAGACTGA

Protein

Gene

>g422708.t1
ATGCTGCCGAATATACTTTTCTTCGTAACCATATTTCTTGTGATTGTACTGGCACAAATTAAAAGAAGAAGAAATCAAAGAAAATACAATCTCCCACCAGGACCAAGAAACCTGCCAATAATCGGAAACCTTCATAATCTCAGTGAGCTTCCACATCGTTCTTTCTACAGATTCTCTCAAAAATATGGACCTCTTGTTTACTTCAAAGTGGGAAGCATCCCCACAATAGTTGCTTCTTCTGTTGAAACTGCAAAAGAGTTCTTGAAAACCAACGATCTCAACTGTTGCAGCCGGCCACTTCTCACCTCAGTTGATAAATTGAGTTATGGCTTGAGCGATGTTGTCTTCATACCTTATGGTCAAGAGTGGAGAGTTCTACGTAAAATCTGCATCCTCCAACTATTCAATATGAAAAAGTTAGCATCATTTCGATCTATCAGAGAAGAAGAGGTTAAAAAGATGGTGAGAAACATATCGGTTTCAAGAGATACAGAGATTAACCTGGAAGAGGAGCTTATGTTGCTTGCCAATAACATTACATGTAGGACTGCATTTGGAAAACAGTATTTGAAAGATGGTGGTGGGGCAAACATACGTAAACTTTTGAAGGAAACACAAGCCTTGTTCATGGCTTTCTTCTATGCTGATTACATACCCATGCTTGGATGGCTGGATGTTGTTAATGGTTCGCATGCTAGGTTACAGAAGAACTTTCTTCAACTGGATGAAATATATCAGCAGGTTATTGATACACATATGAGCAAACAAGATTGTTTTAATAGTGGAAGGGACACTGATGAAGACATTGTTGATTCTCTATTACGTATACAGAGGACTACAAATGAGTTGACGAATGAACAGATTAAGGGAATCCTTATGGTAATAACATTCATTTGATTTATTCATTCTTTTTTTTCCCAACATATCACTAGCTCTTTTAGCCATATAAAATAGGAGTTTAGTTTTAATTATACAAATATACCAGATTAACTATTCTTATCCAATCTATCCACAGACCTGAATGTAATATGTAACATATAAATACATCATATATCTGATCATGTATCCTGGTACGAATAGAAATATAGGTAGTTTTTAAAACGTTATCTTCAGATTGTACAGTGTTACAGTTATGCTTCTATACCATTGGCAAAAATTCACTATTCTATATAAAGTATAATATGGTTACATATTTATCATTGGATGGGTATATTTGGTAAGGATCCTTTTTCTTTTTAGAATATATTTGTGGCTGGGTCGGATACATCCTCAGCAGCAGTTGAATGGGCAATGACGGAACTTATGAGAAATCCGAAAGCATTGAAAAAAGCACAAGATGAAGTAAGAGGAATGTTCATGAAAAGAGAAGGGAAAATAGAAGAAAGTGAGATAGGCAAGCTTACATATATGAAATGTGTATTAAAGGAGACAATGAGAATGCACCCACCAGTGCCTTTACTAGTTCAAAGAGAGACTATGCAGCATTTCAAGGTCGACGGCTATGATATTCTTCCCAAAACAAGATTGATGATTAACGTGTGGGCAATGGGAAGAGATCCAAATGTTTGGGAGAAGCCTAACGAATTCTGTCCAGAGAGATTTATGGATAGTTCAATTAACTTTTGGGGACATGATTTTGAGTTGATACCATTTGGAGCTGGAAGAAGGATATGTCCAGGAATGCATATGGGAATTGCGGTGGTTGAGATTGCTTTGGCAAATTTACTATATCATTTTGATTGGAAGTTGCCGGAAGGAATGACGAGAGAGGATATCGATATGGATGAGTCTCCGGGAATTACTGTGCATAGAAACTCTCCACTTAAACTCATGGCTGTGCCTGTGAATCATGGAGAAGACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264444.1	1.3e-169	cytochrome P450 71A9-like
Swissprot	O81970.1	3.2e-128	Cytochrome P450 CP1
trEMBL	A0A6P5GVP6	4.0e-152	cytochrome P450 71A1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G26180.1	45.51	5e-126	448	CYP71B20	cytochrome P450, family 71, subfamily B, polypeptide 20

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g422708	AT3G26180.1	501	251	8	12	496	8	502	45.51	5e-126	448
g422708	AT1G13080.1	501	258	7	5	493	5	499	44.91	6e-126	447
g422708	AT3G26170.1	504	257	8	8	496	5	502	44.84	7e-126	447

Ortholog group

Species	Genes
Allium cepa	g188955.t1; g188956.t1; g374713.t1; g421063.t1; g422708.t1; g95344.t1; g95346.t1
Allium fistulosum	AfisC4G07006; AfisC5G02654; AfisC5G02688; AfisC5G02689; AfisC5G02694; AfisC5G02707
Allium sativum	Asa0G03530.1; Asa0G05283.1; Asa4G00056.1; Asa4G00057.1; Asa4G01625.1; Asa4G04440.1; Asa4G04446.1; Asa4G04449.1; Asa4G04451.1; Asa4G04481.1; Asa5G05828.1; Asa8G01235.1
Arabidopsis thaliana	AT1G13080.1; AT1G13100.1; AT3G26150.1; AT3G26160.1; AT3G26180.2; AT3G26220.1; AT3G26230.1; AT3G26270.1; AT3G26280.1
Oryza sativa	LOC_Os12g32850.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	32	483	319.9	2.4e-95

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20617	CYP71A; cytochrome P450 family 71 subfamily A	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network