Detail information of g424007


Location
GeneChrStartEndStrand
g424007Scaffold_79568:HRSCAF_4626544469256023+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010924703.12.4e-123probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1
SwissprotC0LGG8.15.7e-114Probable LRR receptor-like serine/threonine-protein kinase At1g53430
trEMBLA0A6I9RDW71.7e-123probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G53430.165.921e-117 420Leucine-rich repeat transmembrane protein kinase

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag424007.t1
Allium fistulosumAfisC1G08977
Allium sativumAsa1G02458.1; Asa6G03959.1; Asa6G03962.1; Asa8G02553.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF07714.14Pkinase_TyrDomain56303147.83e-43

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0016020Cmembrane
GO:0003824Fcatalytic activity
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0005623Ccell
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0008150Pbiological_process
GO:0009987Pcellular process
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019538Pprotein metabolic process
GO:0036211Pprotein modification process
GO:0043170Pmacromolecule metabolic process
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044464Ccell part
GO:0071704Porganic substance metabolic process
GO:0071944Ccell periphery
GO:1901564Porganonitrogen compound metabolic process
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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