result

Gene information

Detail information of g426046

Location

Gene	Chr	Start	End	Strand
g426046	Scaffold_79781:HRSCAF_462867	169618	172850	-

Sequences

CDS

Protein

Gene

>g426046.t1
ATGATAATTATTATAATAGTAAAAAATCAAGCGAATAATCAATCATCACTCATTATAAAAGGCAAAAGAATGAATTTTTCCCTGACTGGCCGTGTTCTCTCTGTTCTGTTCGGAAATTCACCTCTTTAGCGCTATTTCTATTTGGGTAAGTCCCGACTTTTATTTGTTTATTCTGCTTCTTCTGTTAGCGCTTCTTCACATGTTCACTTGATGCTATCTGACTGCTAACTTAATTAGTCGCCGCAATATTGAATAGTTGTGTTTGGGATCCGTGGAAGGCTTGGTTCATGTTGATTTTATTGCTTAAACTGAGATTTTATTTGTTGGGTACAACTTGAATTTTGCATTTAAAAATTAGCAGTGAAAATGCAAAATTAGCGGGTGAATTTATCTAGTTTCCTATATTGCTTTGAGTTTTGCATAGAATTGTTATCTATCGCCGTAATATCGTTTACTGAAATATTGCCACGCCTACAGTTTGCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATATTGAAGAATTTACAGAACATTTAATTTCCAAGTTTGGATAGCTGTAGGCGTGCCAATATTTCAGTATGTATATAGAGGGACAACGTACATGGACTATCTATTTATCAAAATTTTATACCTGCGAAAATAAATTTCAAACCAGTAATTTGATATACATTAGTCGATTTGATAACATGCATTAACTATTTACTTTTTAAAAATACTTATTGCGCAATTAAATTAAACGGGCTTTGCACACCGGTCCCATTGCTGAAATTGTTGGAAGAAAAGTCTCAATCTCGGTAGCGAATACGTAATATGTCCCTACTTTTTAAATAAAAAAAAGGCAAAATAGCTTACAGTTTCTTGATAGAAAATTCAAGTTACCCGCGCTTTCCAAAAATGAAGGTAGCGTTTGGTTTAAAATAAGTTTTGTGTTTTGAGTTTTGAACATTAATTACAAGATATGAGAGGAGGGGATGACGAAACTGATGAAAGGAAGATGGAGAAGACCACGAAGGATGGAAAAATGATGAAAGGACGGATTGCTTTCTCGTGCTTCTATTTTTCAAAACATAAAAAATAAAGAAAAGTTGTTTTCTATTTTGTACATTAGCTTTGTTTTTCAAGTTGGTCATTTTCCACGATATACGTACGTCGTGTGCATTTTTGTGTGCACAATAAATCCAAAACTAAAAAAGGTTAACCAAACACTACCTAAATTCCTTTATTCATAAATAATAATAATAATAATTTTATTTAAGTATAATTTTAGTAAATAATTACAGTTTTTCACCATTATAGATATTTATAGAATTTTATATTTTTTTCCCAAAACTGCAAGTTCCATTGCATTTTTTGTCAGGATGCACTTTTTTGTCAGAAAAGTGCAAGTTACCTTGCGTTTTCTATTTTTCAAAAATAGGGACCTAATTTCCATATTTGTTTCTGTAAGGAGTTTTTTTTTATAACAACATCAGAAATATGGATCTGTAGCTATTATCTTGTAAATTATTAATTTCTCTGCATGTGCATTGAATGAAAGTTTCAACCAAAAGATATGGATGATTCACTTGTAAGTTTGCATGGCAAAAGGTGGTTGTCCAACTTTGACAGATGATGAAGTAGATTAAATCTGAAAAAAATGTCAGTAAACGATATCCACGCATCAATTTCCAGAAATGGAAGTGGAAAAAAGTGAAGAATGGAAAACACGTAACAGATTATCTATGTAGTTGCATGCATTATGCTTACACGATTGTATTGAATAAATGATAAATGAATGATTACCATGTTGTGGATGTGAACACATGGGACTTCAAAGTTTGGTGATATAGGATTTATACTCTACTTAAGTCCTAAGAACATCTAACACACGTAAAAGTGATATATGCTCCTTATTTCTAGGGCAACCTGTCTCCTTTTCCTATTATCCCATATCACATCTCCAATGTACACTTCTCACCTCTCGTTTTGCTAATTTTCTTAATTTTGTTCTCTCACTTGATATGTATTATCAAAAAATAAAAATAAAGAAATCAAGGTTTGTAGAATAACCACTCATTATAGAAGGCACAAGAATGAGATGCCTCTCTTACTTGCTGAGTTTTCTTTTCTCTATTATGGAATTAACTCTTTTGTGCTGTTTATTATTTGGGAAGTCCTGATTTTTATTTGTTTGTTCTATAGTGGTTAGAGGTTTTCTCCGCTTACATGTTCACTTGATATCCGACTGCTAACCTAATTGGTCACTATAGTATTGAATGGTTGTATTTGGGTTTTGTATAATTTTGTTATCTTTAAGTGACCCGCTCTACTGCTCCTTCTCTAGTATCACATTTTTTGCAGAACAGCTAATTTCCAAGACTGCATAGTTTGATGTTTGTCAATATTTTAGAGAGTGAGTGAATGTGTGTGTGTAGATTGGTAATATGCATGAATAATTTACTTATCTAAATATGTACTTGGGCAAATCTACTTCATATCAGTAATTTGATTGATGAGCATCAGTGATTGCATACATTATCTGATTTGACAACATGAATTAGCTACTTTCTTTTAAATTTTTGCATCAGGGCAATTAGATTATAATTATCTCGCTTGTGCATTGAATGAAAGCTTCAACCAACAAAATATGGGTGATGGAGAACTTAACATATCTAGCCAACATCTCATGTCAAGCTCTGACATGTCAAACAGCTTTGACGAGTTCTTGAAGAACACCCACTCATGCACCCACACGCACACCTGCAACCTCCCTGGCCCCTCCACACCAACCCACTCCCACACATGTTACCACACCCACACCAAAGTATTCCCTGCCTCCGAAGGCAAAAACGAAGAGGACAAGAAAACTAAAAAGCCATTAGGCAACAGAGAGGCAGTGAGGAAATATAGAGAGAAGAAAAAGGCTCATGCAGCTTATTTAGAGCAAGAGGTAAAGAAACTAAGAGATATTAACCACCAACTTGTGAAGAAATTACAACGGAAAGCAGCGCTGGAAGCTGAGCTTGTTAGTTTAAGGAGGCTTTTGAGTGATTTTAAAGGGAAGATTGATGGTGAACTGGGAGATTTTCCATTTCAAACATCTTGCAATGGTGAAGGATTGCATTGTAATGTGACTGCACAATGTGGTGGTGGAAATAATGGAATTTTTGGGTTGGATGTGGGTTGCATGCCTGCAGTTGATGACTGCCAGATAAATGCTAACTGCGATGAAGTAGCAAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008788583.1	2.5e-47	basic leucine zipper 23-like
Swissprot	Q8GTS1.1	3.9e-21	Basic leucine zipper 24
trEMBL	A0A8B7MTV7	1.8e-47	basic leucine zipper 23-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G16770.1	55.48	3e-44	175	bZIP23	Basic-leucine zipper (bZIP) transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g426046	AT2G16770.1	155	63	3	57	206	1	154	55.48	3e-44	175
g426046	AT4G35040.1	170	60	5	57	206	1	169	52.35	6e-41	164
g426046	AT3G51960.1	131	60	2	86	214	52	182	52.67	5e-34	141

Ortholog group

Species	Genes
Allium cepa	g426046.t1
Allium fistulosum	AfisC4G07011
Allium sativum	Asa5G05838.1
Arabidopsis thaliana	AT3G51960.1; AT3G51960.2
Oryza sativa	LOC_Os01g58760.1; LOC_Os05g41540.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07716.12	bZIP_2	Family	126	181	45.7	4.6e-12

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0003674	F	molecular_function
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0046983	F	protein dimerization activity
GO:0008150	P	biological_process
GO:0042802	F	identical protein binding
GO:0042803	F	protein homodimerization activity
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0047484	P	regulation of response to osmotic stress
GO:0048519	P	negative regulation of biological process
GO:0048583	P	regulation of response to stimulus
GO:0048585	P	negative regulation of response to stimulus
GO:0050789	P	regulation of biological process
GO:0065007	P	biological regulation
GO:0080134	P	regulation of response to stress
GO:1901000	P	regulation of response to salt stress
GO:1901001	P	negative regulation of response to salt stress

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network