result

Gene information

Detail information of g426107

Location

Gene	Chr	Start	End	Strand
g426107	Scaffold_79783:HRSCAF_462869	392009	394908	+

Sequences

CDS

>g426107.t1
ATGGATGTTTTCCGTGACGAAACAGAAAATAGGGTAAAGTGTAGGCTTCCAAAACATCCTCTTCTTTCTCCTTTCTATCTAATCAAGCAGCAAGAAATGGCAGGATTAGAAATGCGCAGTTGCTCCGAAGATGTTAACGGCACAAGTTGGATACCACAAGTTGATATGGAGTTTGCAAATGAAGAAGAGGCCTATCAATTTTACAATAGGTATGCTAGAGAAGTAGGATTTAGTGTTAGAAAAGATAGGGTAAACAGAAGAGCTTCTGGTGTGATAATAGCAAGATCTTATGTTTGTTACAAAGAAGGTTTTCAAGGGAATAAAAATGATGAAACTGAACAGAAGAAACCTAAGAAGAATGAGAGGACTGGTTGCCTTGCACGCATGATTATCAAAATAACAGAAAATGAGCGATATCGTGTCAGCGATTTTTATGCAATGCACAATCATGAACTTGTGCCTAACACTGATGCACACATGCTGAGAAGTCATAGATCAGTTAAAGAAAGAAAAATCAGTAAGGTTAGGAATCATGTGCCTCAGATGTCTATGATTGAGTATTTGGTTAGAAGAGCTGGAGGATATAAGCAAGTAGTTTTATATTCTGTTGAGGAAGCTATGAATCAAAGCTGGTCACCAAAAATAGATATGGAATTTGAAAATGAAGATAAAGCTTATGCATTTTATGCCGAGTATGGTAAAAAGATTGGATTTGATGTTCGAAAAGCATGTGTGAACCGGAGACCTTCAGGGGTGATAGTAGGAAGAACATACGTTTGTCATAGAGAAGGAGATAATTGTAATACGACAGATAAAAATAAAATAGAAAGGGACAAGTTACATTCAAGTGAAAGGTGTGGTTGTCTTGCTCGCATGATCATCAAACTTCAAAGCAACGGTAGATACCGTGTTTCTGAATTTGAGCCAAAACATAATCATGCATTTGTAACTGCTAGAAATATTCATACCTTAAAATCTTATAGAGAGCCCAAAAAATTTGAGGCTTCTTTACCTTGTATGCAATCTAGAAAATCTTTATCTACAAAAAGCAAAGAATCGTTGAAGATCGGCGATGTTGGAGCTATATTGCAGTACATGCAAGAAAAGCAAACTGATGATCCTTCATTTTATTACGCATTGAAACTTAACAAAGAAGGTCAACTAGCCACTGTATTTTGGGCCGATGAGAGGTGTAAGGTAGACTACAGCTATTTCTGCGATGCATTATGTTTGGACATGACATATCAAACTAATAGTTGTGGTAGGCCATTGGCGTTATTCTATGGTGTAAATCATCATAAGCAGATTGTATTTTTTGGTGCGGCGTTACTCTACGATGAAACAGAAGAATCATTCATGTGGTTATTACAAACATTTAAGTCTGCAATGTATGAGAAACAACCAAGGGTTATTTTAACAGCTGAAAATGAATGTTTATGCAGTGCTGTTGCTTCAATGTGGGAAAATACAGTTCATCGTCTCTGTGCATGGCATATATACCATAATATGGTAAAACAATTAGGTCAGGTGTTTCAAGGATCAAAAATGTTTTCATGTGATTTCAACAAAATACTCTATGAAATTGAAGAGGAGGACGAGTTTTACTTATCATGGGAAAATATGTTGGAGAAGTATGAGCTCCGGCACAACGCATGGTTGAACAAACTATTTGAGAACAGAGAGAAATGGGCAATGCCATATATAAGAGATTCATTTTGTGCAGAAATAAATAGTGCACAACGAATGGCCAACTTAAACAGTAAACTTAAATCACTCTTGAGCCAAGAAAGAGATAATTTACAGTATCTGGGGCACTTAGAAAGATTATTTTGTGAGCAACGTGTAGCAGAAGCAAAAGCTGATCGTGTTGCTGCTCAGAAAAATATCATACCGATAATTTCTGCAAGAATGTTGAAACAAGCTGCAAACTTATATACTCCAACGATATTTGAGTTGTTTCAGAAGGAGTTTGGTTTGTCCATGGACTATTTAGTGTACAAATATGAAGAGGCTGATAATGTACATCAATTCAAGGTTAAAAGTGAGGAGGACCCAAAAGAATATGTGGTAAAGGTTTACCGTTTAAATGATGCGATAACATGTAGTTGCAAAAAGTTTGAATTTGTTGGTATTCAATGCCGTCATGTACTAAAAACACTTGACATACTAAATGTGAAAGAGCTCGCACCAAAATATTTTCTGAAAAGGTGGAGAAAAGATGCTAAGTTTGGGTCCCTGAGAATCTCTCACGTCGAATCCATTTTATCTCAAGAGAAACTACACAATTCTTTAAGCCAAATATTTGGTCTGATAGCATCCAAGGGCTCCGATTCTCTTGAATCATTTACTTTTATAGAGAATCGATCAGATCAACTGATCAACCATTTGCAAAACATTTTATTTTCAAGACCACCTCAAGATCCGCATTTTTCTAGTTAA

Protein

Gene

>g426107.t1
ATGGATGTTTTCCGTGACGAAACAGAAAATAGGGTAAAGTGTAGGCTTCCAAGTCCAAATAGCAAAATCGGTCTCCGTCAATTTCAATGACAATTGAAGATCATACGAATTGTAAGAACATCCTCTTCTTTCTCCTTTCTATCTAATCAAGCAGCAAGGTCAGTCCCTTTTACTCGTACCTTTTAAAAATAGTTTTGTCAGAACCTTAAAATCCTACTATTTCACTCCTGATTTGTGCTAAGTTACGAGTCGGAAACTTCGACATTACAAATTTACCGAGTTCCTTTTTTGGAATTGGAAGAGGCCTTCTTTCGTATAGCTTAAAATTTTCGTTGTCTATGAATACGAAAATTGGATTCTTATGAATCTAGGTTTTGGACATCGATACTTGATAGCTTATAAATCTACATTTGAAGCGTGCAATACCCAATTCAATCCACCATCGTTGGCAAAATTGAGTTTTTGTTCTAATTCATCGTTTTATTACCTACTAAAATATATTATGCAAGTGAATTGGGTCATTAAAAATTTATTCTTTTAACTTATTCATTCCAGAAATGGCAGGATTAGAAATGCGCAGTTGCTCCGAAGATGTTAACGGCACAAGTTGGATACCACAAGTTGATATGGAGTTTGCAAATGAAGAAGAGGCCTATCAATTTTACAATAGGTATGCTAGAGAAGTAGGATTTAGTGTTAGAAAAGATAGGGTAAACAGAAGAGCTTCTGGTGTGATAATAGCAAGATCTTATGTTTGTTACAAAGAAGGTTTTCAAGGGAATAAAAATGATGAAACTGAACAGAAGAAACCTAAGAAGAATGAGAGGACTGGTTGCCTTGCACGCATGATTATCAAAATAACAGAAAATGAGCGATATCGTGTCAGCGATTTTTATGCAATGCACAATCATGAACTTGTGCCTAACACTGATGCACACATGCTGAGAAGTCATAGATCAGTTAAAGAAAGAAAAATCAGTAAGGTTAGGAATCATGTGCCTCAGATGTCTATGATTGAGTATTTGGTTAGAAGAGCTGGAGGATATAAGCAAGTAGTTTTATATTCTGTTGAGGAAGCTATGAATCAAAGCTGGTCACCAAAAATAGATATGGAATTTGAAAATGAAGATAAAGCTTATGCATTTTATGCCGAGTATGGTAAAAAGATTGGATTTGATGTTCGAAAAGCATGTGTGAACCGGAGACCTTCAGGGGTGATAGTAGGAAGAACATACGTTTGTCATAGAGAAGGAGATAATTGTAATACGACAGATAAAAATAAAATAGAAAGGGACAAGTTACATTCAAGTGAAAGGTGTGGTTGTCTTGCTCGCATGATCATCAAACTTCAAAGCAACGGTAGATACCGTGTTTCTGAATTTGAGCCAAAACATAATCATGCATTTGTAACTGCTAGAAATATTCATACCTTAAAATCTTATAGAGAGCCCAAAAAATTTGAGGCTTCTTTACCTTGTATGCAATCTAGAAAATCTTTATCTACAAAAAGCAAAGAATCGTTGAAGATCGGCGATGTTGGAGCTATATTGCAGTACATGCAAGAAAAGCAAACTGATGATCCTTCATTTTATTACGCATTGAAACTTAACAAAGAAGGTCAACTAGCCACTGTATTTTGGGCCGATGAGAGGTGTAAGGTAGACTACAGCTATTTCTGCGATGCATTATGTTTGGACATGACATATCAAACTAATAGTTGTGGTAGGCCATTGGCGTTATTCTATGGTGTAAATCATCATAAGCAGATTGTATTTTTTGGTGCGGCGTTACTCTACGATGAAACAGAAGAATCATTCATGTGGTTATTACAAACATTTAAGTCTGCAATGTATGAGAAACAACCAAGGGTTATTTTAACAGCTGAAAATGAATGTTTATGCAGTGCTGTTGCTTCAATGTGGGAAAATACAGTTCATCGTCTCTGTGCATGGCATATATACCATAATATGGTAAAACAATTAGGTCAGGTGTTTCAAGGATCAAAAATGTTTTCATGTGATTTCAACAAAATACTCTATGAAATTGAAGAGGAGGACGAGTTTTACTTATCATGGGAAAATATGTTGGAGAAGTATGAGCTCCGGCACAACGCATGGTTGAACAAACTATTTGAGAACAGAGAGAAATGGGCAATGCCATATATAAGAGATTCATTTTGTGCAGAAATAAATAGTGCACAACGAATGGCCAACTTAAACAGTAAACTTAAATCACTCTTGAGCCAAGAAAGAGATAATTTACAGTATCTGGGGCACTTAGAAAGATTATTTTGTGAGCAACGTGTAGCAGAAGCAAAAGCTGATCGTGTTGCTGCTCAGAAAAATATCATACCGATAATTTCTGCAAGAATGTTGAAACAAGCTGCAAACTTATATACTCCAACGATATTTGAGTTGTTTCAGAAGGAGTTTGGTTTGTCCATGGACTATTTAGTGTACAAATATGAAGAGGCTGATAATGTACATCAATTCAAGGTTAAAAGTGAGGAGGACCCAAAAGAATATGTGGTAAAGGTTTACCGTTTAAATGATGCGATAACATGTAGTTGCAAAAAGTTTGAATTTGTTGGTATTCAATGCCGTCATGTACTAAAAACACTTGACATACTAAATGTGAAAGAGCTCGCACCAAAATATTTTCTGAAAAGGTGGAGAAAAGATGCTAAGTTTGGGTCCCTGAGAATCTCTCACGTCGAATCCATTTTATCTCAAGAGAAACTACACAATTCTTTAAGCCAAATATTTGGTCTGATAGCATCCAAGGGCTCCGATTCTCTTGAATCATTTACTTTTATAGAGAATCGATCAGATCAACTGATCAACCATTTGCAAAACATTTTATTTTCAAGACCACCTCAAGATCCGCATTTTTCTAGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010930749.1	1.4e-253	protein FAR1-RELATED SEQUENCE 5
Swissprot	Q3EBQ3.1	3.2e-53	Protein FAR1-RELATED SEQUENCE 2
trEMBL	A0A8K0NE02	1.1e-255	Protein FAR1-RELATED SEQUENCE

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G06250.1	29.70	1e-87	321	FRS7	FAR1-related sequence 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g426107	AT3G06250.1	771	450	17	52	782	28	746	29.70	1e-87	321
g426107	AT5G18960.1	794	455	21	42	782	32	770	29.09	7e-83	305
g426107	AT4G38180.1	562	353	5	213	742	73	634	31.49	7e-83	305

Ortholog group

Species	Genes
Allium cepa	g426107.t1
Allium fistulosum	AfisC2G06542
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03101.12	FAR1	Domain	66	154	84.3	6.9e-24
PF03101.12	FAR1	Domain	228	316	70.2	1.7e-19
PF10551.6	MULE	Domain	409	502	91.5	3.3e-26
PF04434.14	SWIM	Domain	696	720	25.5	6.9e-06

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K17604	ZSWIM3; zinc finger SWIM domain-containing protein 3	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network