result

Gene information

Detail information of g426848


Location
GeneChrStartEndStrand
g426848Scaffold_79863:HRSCAF_462949153723154187+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK69961.15.6e-22uncharacterized protein A4U43_C05F28760
SwissprotA0A3Q7I5Y9.11.6e-18Ethylene-responsive transcription factor C3
trEMBLA0A5P1EZQ34.0e-22AP2/ERF domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G18450.134.948e-2092.4Integrase-type DNA-binding superfamily protein

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Ortholog group
SpeciesGenes
Allium cepag162531.t1; g254374.t1; g326881.t1; g388304.t1; g388305.t1; g426847.t1; g426848.t1; g91548.t1; g99328.t1
Allium fistulosumAfisC1G00996; AfisC1G04610
Allium sativumAsa7G00950.1; Asa7G00951.1
Arabidopsis thaliana
Oryza sativaLOC_Os05g49010.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00847.17AP2Domain7112137.61.8e-09

Gene Ontology
AccessionOntologyName
GO:0000160Pphosphorelay signal transduction system
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0006355Pregulation of transcription, DNA-templated
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0042493Presponse to drug
GO:0009719Presponse to endogenous stimulus
GO:0009723Presponse to ethylene
GO:0009725Presponse to hormone
GO:0009755Phormone-mediated signaling pathway
GO:0009873Pethylene-activated signaling pathway
GO:0009889Pregulation of biosynthetic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010200Presponse to chitin
GO:0010243Presponse to organonitrogen compound
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032870Pcellular response to hormone stimulus
GO:0042221Presponse to chemical
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071310Pcellular response to organic substance
GO:0071369Pcellular response to ethylene stimulus
GO:0071495Pcellular response to endogenous stimulus
GO:0080090Pregulation of primary metabolic process
GO:1901698Presponse to nitrogen compound
GO:1901700Presponse to oxygen-containing compound
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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