Detail information of g427382


Location
GeneChrStartEndStrand
g427382Scaffold_79944:HRSCAF_463030634812639421-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK55993.11.4e-71uncharacterized protein A4U43_C10F3040
SwissprotQ9FV71.16.6e-50E2F transcription factor-1
trEMBLA0A5P1E2081.0e-71E2F_TDP domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G22220.249.553e-53 205ATE2FB;E2F1;E2FBE2F transcription factor 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag427382.t1
Allium fistulosumAfisC3G01130; AfisC3G01139
Allium sativumAsa2G01056.1
Arabidopsis thaliana
Oryza sativaLOC_Os04g02140.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02319.17E2F_TDPDomain13820184.33.9e-24
PF16421.2E2F_CC-MBDomain22131588.43e-25

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K06620E2F3; transcription factor E2F3EC:- Cell cycleko04110
Cellular senescenceko04218

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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