result

Gene information

Detail information of g430163


Location
GeneChrStartEndStrand
g430163CHR6210160859210161629+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252797.11.3e-59transcription factor PCF5-like, partial
SwissprotQ8LPR5.19.6e-36Protein MATERNAL EFFECT EMBRYO ARREST 35
trEMBLA0A5P1FM809.2e-60TCP domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G15030.179.552e-39 159MEE35;TCP4TCP family transcription factor 4

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Ortholog group
SpeciesGenes
Allium cepag184722.t1; g430163.t1
Allium fistulosumAfisC6G01695; AfisC7G02806
Allium sativumAsa3G02588.1; Asa8G04830.1
Arabidopsis thalianaAT1G53230.1; AT3G15030.1; AT3G15030.2; AT3G15030.3
Oryza sativaLOC_Os01g11550.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03634.10TCPFamily51164114.75.1e-33

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0006355Pregulation of transcription, DNA-templated
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0009790Pembryo development
GO:0008150Pbiological_process
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009733Presponse to auxin
GO:0009791Ppost-embryonic development
GO:0009793Pembryo development ending in seed dormancy
GO:0009889Pregulation of biosynthetic process
GO:0009965Pleaf morphogenesis
GO:0009987Pcellular process
GO:0010016Pshoot system morphogenesis
GO:0010033Presponse to organic substance
GO:0010154Pfruit development
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0030154Pcell differentiation
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0040034Pregulation of development, heterochronic
GO:0042221Presponse to chemical
GO:0045962Ppositive regulation of development, heterochronic
GO:0048316Pseed development
GO:0048366Pleaf development
GO:0048367Pshoot system development
GO:0048598Pembryonic morphogenesis
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048825Pcotyledon development
GO:0048826Pcotyledon morphogenesis
GO:0048827Pphyllome development
GO:0048856Panatomical structure development
GO:0048869Pcellular developmental process
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0090698
GO:0140110
GO:1905392

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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