result

Gene information

Detail information of g430704

Location

Gene	Chr	Start	End	Strand
g430704	Scaffold_80328:HRSCAF_463414	193235	198875	-

Sequences

CDS

Protein

Gene

>g430704.t1
ATGGATCATTCAAATTTCATGAGTCAGTGGAGTTTCAGCGATCTTGGTCAGCAGCAAATCTTATCAGAAAATGATTTCCAGCAACCTCTTTCTCTGTATACACAAAATCTGAATCATTTTAATTCATCTTTGTTGGAAGAACCCCTATTTTCTGAGAAGCCAAGAAGATTTCCTAAAACTATTAGTTGGAGCTCTGAAGTTATCCCGAAAGGCAAAATCTGTTCTAATGGAGAAATAATTAACTGGGGATGTCAGTTAACCAATCATGGTAAAGTTTTACCGAAGAAAACTCCTCAAGAACATATAATTGCAGAGAGGAAAAGAAGAGAGAAGCTTAGTCAGAAATTCATTGCACTCGCAGCAATCATCCCTGGTTTAAAGAAGGTATATTTGTTCTTCTTATAAATAAAAATTCATCTTATTTAAAATCATTGGTTTCTACATATGAATATATGATCGAGAAGTCAGTGATTGAAATAATTTGGTTGGTTGTGGACATGATTTCAAAGAAAATAAAGCAAAATAAAACGAGATAAAAATCATAATTATTGATACATACGCTTATAGAAAATTTTACATCTAAAACGAAGGAACACAGAAAGTTAATGCTCTCATCAATATATTAAATAAGGTCGGTTCACAACTTACTTAGCCCTTTGAAAATTGAATACCAGAAGTCCATGCTACGTTGGTTGTAGAAATATTGTCTACGTTTACATTACGCTTTGAAATCTTTTGTTCTCAGATGTATTTTTAGTTTTGGTCTTTATTTTATACTTGTGCAAACAAATTAAAAGAGAAATTAAAATTTTGAAACCATAAAAGTTAATACCATTGTTTCAAAATTGGCCGGTATGTAGGAACTTTCTTGGCATGTAAGATAAATATATATATATATATATATTAAGTTTTGTCGGACTATCTTATTGTTATGTATGAGATAAAGATACAAGATTTTACATGGATCCATTTTCTTTTTTTACATTTGCATTTTGCATATCAAGAATGTGATTACTAGCTATAATTCCATTTATAGGCATGCCTAAGCTTAATTTGTTGTTTTGGTTTCTATACCATATAATATAAAGACATTCATATATATAAACATGTAACATACCTATAGCAACAATTCAGAAAAAGTTAATTGGAATTGAAGAAGCCAGCATAAGATAATTTGTTTTTTCATGAAGCTACGGTCAACGTGAATCTTATGACATTTTAGCTTTATTAAGGTAGAAGTAATACTGGATATTGATAATAGTTGATTTTTTTTTTCTTAACATTTTTAGTTGACAATGATCACACTGTGTAAAAACATGTTTTTACTGTACAAATGCAAGGCTGTCGGTCTTCGTATATACGTTTTCACATTTTTATTGTTTGATTATTCAACAAACCCACATGCACTTGATATTGTGCATGCACTATGGATGAACCTTTATTCTGGTTCGGAGCCTTTGAATAGCATAATTGGTAGAGAGTTTTCTTTGCCATATGATATATTCAAAAACTTGTCCAACTTAAGTAATTTGAAACTTGTTATTTCCTCCCATGCATGTTTTGTGAATATCGCATACCTACATAAGTTACGTGCATACATGCATAACTTAATTATAAGTTACCTGTAAAAATCATATCCCTGAAAAATGAAAATGCCAACAACCATTTATCAAATAATTATTTCAAAAACAAATTATAACAAAACAAATTATCAAAAGAATATCGAAATAATCCAGAAAGAAATATATTCCTGATTTCAAATACTTCAAATAAACTCAAAATTTTATTTTGTTTTCCTTATGTTAAATAAAAGGATCTTTTTTTCATCAAGATTAAAACTAATTTTTACAATTTGATAAAATCAATCAAAAGAAGAAGAAAAATCAGGACAAATCACTTGCGTTTTATAATTACCCAACAATTTAAAAAATTACTTTTGAATTAAAACTAAACATAAGACAAAGTAAATTGTTAAATTTTTTTCTAGACAAAATGAAATGAATTAAAACGAGAAAAGAAACATTCTTAGAAACCATGTAAGTATTTTTCACAACTTTTTGATTGCCACTTTTTTCGTTGAAAATGATATGTAATCGTATACTTCTTAAGTTTGATAATGTTCTAATATCAGCGTTTGGTTATCTTCATTATATTATAAGAATACTAAGAAACTTTTGGTTAACTACGTTTCAGTTTGACTTCGTTTAAAACCAATGTTTGAAAACACGGAACTCCATCAATATTTTAAGTTCAGTTGGCAATCTGGCATAAACCTTAGTGCCAGAAAGTGGAATATTTTGGTTTGAAGATTGGTAGCTATCAAGGGAGTTTTCTTAGAATAAATATTTCTAAATTTTGTTACGCTGTCTTGCTATGTATATTAGGGTGTACTTATGAAGGGTTCAATTCCTCCGTCCTCAATTTTCCTGTCCCTCGGTATCAAATTCATCTCAATCATTAATTTTGATATGATCTGTTTGCTTTAATAGCATGATAAGATCCATTCAAAAATTAAAGTTTATGATGTGTGGTTGAGATTTAATTGGACACATGAGGACAGTGGAATTATAGACAAAGAAACTGAGTTGATTTATGAACTAGATGTGTTGTCTAATTTCCGTTCAAGCATTCTCCATCATGATATATGAAGCCTGTCGTTGTATCTAACATCTTATAAAAACTATATGAGAATTTCGGATTGGTGATAAGAACCGAAGAACAAGGAAGATTATTTGTTATTTCATCCAGTTAATTTAAATAATATGACTTTTTAGCTTGTTAACATACTAATGGTAGAGGTCCATAATATCTGATTTTCCACCTTTTTAGTTGACAATGGTCAATGGGCATGTAATGTAAAGTCATTTTTCACTGCACATATATGGCCACCCCTATCATCTTCTGAGCTACAAGCTAGTAGAGATGTTCATACCATACTAAAGACCATCTCCTTGAAATTTGAGCTCATTTAAATGTCTAACATAAAAACTTTGATGTTTAAAATAACGTTTGAAATATACATTTTAATGGTGAATAATGACTTGTAATTCTAAAGAGCCTAGAAAGTCCTAAATGATATCTACTTTGTTGATATGATATTTAAATCTGTAATATCCACAGAATTTCTAACCATTAGAAGTTGTGTAGATCGAAATAAGATAAGAATGATAATGGATCACAGTGAACTACCATCGCGGATAAAACACACATCTTTAATAATAATTGTAAAGTGTCACACTTTTTGGTCTCAACGCGAACTATCGAAAAAGCTGCTCTACAAATATTAACAAATCTAAATATCGCTTAAAAACATGACTTAATAATTAAATTTCATTTTCAAATTTGAAAGGTCTCTCTGCAGATATTAATAATTTTAATATCACTTCACAGTAACAATTAACAAATAAACTTGGTTTGAAAATTAGTTCTTTATTTATTAATTATAAAAACAAAAATTCAAACTAACAAAAATTTGGTTGTTGCAACTTAGCAATAAAATTTAAACAACCTACACATTATTTCAGGACAAAAACATGAGCAAATAATTGTACAAATTATTTTCTTTTGAATGTGTTAAACATATATGATTTGTAGAAAAAAACCGATCGATGCATGAATTGTGTGCCTTCATCATACGCGAAGCGCATGGCGTAACGCTCGTGTGTACGTATGTGCGTGCGTGTGTATCTAATCGTACCTTTTAATATCATAATTTGGACCGCTTCGGAAAACAACTCCGCACACTACTCTTTTTTTCTTATATAAAGAAAATTGCTTTATCAAGATCAAAATCAGAAGTATTGACAACAATGATCTATAATCATGTACTTGTTATTTTATAATTTTGATTGAAAATTCCTTTTTGTTGAAATAACATGTAACCATATACGCTTTTAATACTCTTCTAGCTGGCACGTTCTTTAATTTTTTAAATTAAAAAACTTAGATAGTATTTGGTTTTTAAAAAAAGAGTTTTGTGTTCTGTGTTTTTTAACGTTTACTTTAAAATGCCCAAAAGATAAGAAGAGATTGAAAATTATCATTTTGGAAAATGGTTTTAACATATAAAATGAAAATTGTTTTTCGTTCTTGTTTTCCACCTTTTGTGAAATACTAGATACTATCTTCTTTCTTCCTCTTCTCGCATTTGTTCCAACGATTAGGATTTCCAATTTCTCTTCCTCTCCCATGTCGTTTCAACGTATAATTTGAAAATGCAAAACAAAACACTTATTTTAAAACCAAACACTAACTAAGAAACATCAAGTTAACCATGTGTTCCTATTTGAATATGTTTTCAGGTTGACAAAGCTTCCATTCTAGCTGATGCAATCAACTATGTAAAACAATTGGAACAGACTCTAAAATCCTTAGAGAGTCAAAATGCAAGAAACATCGCAGATTCAGCAGTCCTCTTTAACAACTCAAGTGATATTTCCCAAGCAAAGAACTTCACTGGAAATGCATTAAAGCATTCAAACATTCATGGGAACTCCAACAATGTAAGTTCAGCAGAAAATTCAAGGTATCCTGAAATTCAAGTAAGGCTATGCGTAAGAACTGTTATTGTGAAAATCCAATGTGAAAATATCAAAGAAGTGCTAGTGAAAGTTTTATTAGAGATAGAGAAGCTCAATCTTGTAGTCACAAATGCTAGCGCTGTGCCTTTTATCGAATCTTTTCTTGACATAACCGTGACTGCCCAGGTATTCATTTATGGTGTTAAATCAAATTACCAGCTCGCCCTATTTGTCATGGGTGCAGATTTGTCACATGCAAAAATGATATATACAATTATATATACAATTATAAACACATATATACACTGGTACACATGCATATGCATTCTATTTACTCTTTTAATTCAAATAAAACTATGCACTACTTGAATTGGTAGAACTCAAATATCACAATCTGCTGAATTTTGGTTTAAATATAACAGAAAAACACAAAATATTTTTTGGCAAGTCGAGAAAGCTTCACACCAATGTATATGCATCATACTTACATGCGTAAGCACATATATGTATGTATGTAAGCATCCATGCATGCGTGAGTATGTGTATGTGTGTGTTTGCGGACATACATATGTATACGCATCATCATATGACAGCTCATCTGACATAAGCATTGAAACGCCAATCAGAGGTGGGATCTTTGAGATAATTTTTACTTTTCTTATAATTACATGAAGTATGTTTTGCGTGACAAATGCATATTTTCTCATACATACGTGCGTTGACACATGCATACACACACATGCAGAGACACATATACATATGCATGTGCACATTCGTACCGAATGCATGAAGAAATTTTGAGGTATGGTGGAAGTTCTAAGTGATCTAAGAAACGTATTTATTGAAAATTTGTGTTAATTGTACGAAATCAATCGCAGATGGAAGAAGGTTCCTTGTTGTCTACTAAAGCCATTGTGAAGACATTAACCCTCATTTTTCTCCATTCCAATGGTAAAATTAGCTAAATGACAACTAGCTCAAAATTATTATGCATGTTTTTGTCTTTTCAAAAATATATATGAATAAATACAATATTGGCATGATATTATTTTGATCCTTTTTTTCTCTCTATTTAATACTCAGCAGATTTTTCCCAGAAACGGAGAATCCTTGGCGACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	ONK64912.1	5.6e-22	uncharacterized protein A4U43_C07F31400
Swissprot	Q9T072.2	7.1e-14	bHLH transcription factor bHLH025
trEMBL	A0A5P1EGC5	4.0e-22	BHLH domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G37850.1	54.17	2e-17	86.3		basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
g430704	AT4G37850.1	72	33	99	170	151	222	54.17	2e-17	86.3
g430704	AT2G22750.1	73	32	99	171	125	197	56.16	9e-17	83.6
g430704	AT2G22750.2	73	32	99	171	125	197	56.16	9e-17	83.6

Ortholog group

Species	Genes
Allium cepa	g430704.t1
Allium fistulosum	AfisC7G05874
Allium sativum	Asa3G00445.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	100	146	41.7	7.6e-11

Gene Ontology

Accession	Ontology	Name
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network