Detail information of g438407


Location
GeneChrStartEndStrand
g438407Scaffold_81133:HRSCAF_464219115931+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008812302.12.4e-119tubby-like F-box protein 6
SwissprotQ10LG8.14.6e-115Tubby-like F-box protein 14
trEMBLA0A8B7D3B91.8e-119Tubby-like F-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G47900.364.068e-107 383AtTLP3;TLP3tubby like protein 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag438407.t1
Allium fistulosumAfisC7G03373
Allium sativumAsa3G02252.1
Arabidopsis thalianaAT2G47900.1; AT2G47900.2; AT2G47900.3; AT3G06380.1; AT5G18680.1
Oryza sativaLOC_Os03g22800.1; LOC_Os03g22800.2; LOC_Os03g22800.3; LOC_Os07g47110.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01167.15TubDomain71326271.25.7e-81

Gene Ontology
AccessionOntologyName
GO:0003674Fmolecular_function
GO:0005488Fbinding
GO:0005543Fphospholipid binding
GO:0008289Flipid binding
GO:0035091Fphosphatidylinositol binding
GO:0043167Fion binding
GO:0043168Fanion binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.