result

Gene information

Detail information of g440833

Location

Gene	Chr	Start	End	Strand
g440833	Scaffold_81416:HRSCAF_464502	620924	622912	-

Sequences

CDS

>g440833.t1
ATGGAACAAAGATACGAGCCATTAAAAGAATTGGGTGCAGGCAATTTTGGCGTTGCTAGATTGGTTAGAGATAAGAGAACTAAAGAGTTGCTTGCTGTTAAGTATATCGAGAGAGGCAAAAAGATTGATGAAAATGTAATGAGGGAGATAATCAACCACAGTTGTTTAAGGCATCCTAATATAATTCGATTTAAGGAGGTTTTATTGACACCGACACATTTAGCTATTGTTATGGAGTACGCAGCTGGAGGCGAACTATTTGATAGAATATTAACGGCTGGCAGATTTAGCGAGGATGAGGCAAGGTATTTCTTTCAGCAACTGATATCTGGTGTCAGTTACTGTCATTCAATGGAAATTTGTCACCGTGATCTAAAATTGGAAAACACGCTCTTAGATGGAAGTCCAATACCACGTCTTAAGATATGTGATTTTGGTTACTCAAAGTCAGGTTTATTACATTCGATGCCAAAATCTACAGTGGGGACTCCAGCTTACATTGCACCGGAGATTCTTTCACGAAGAGAGTATAATGGCAAGAATGCAGATGTTTGGTCATGCGGTGTGACGCTATATGTCATGTTGGTTGGCGCGTACCCTTTCGAGGATCCAGCAGATCCTAGAAATTTTAGGAAAACGATTGGTAAAATTATGAGTGTTCAGTACTACATCCCTGATTATGTTCGAATATCTCCTGCTTGCAAACACCTTCTCTCTCGAATTTTCGTAGCCAACCCATACAAGAGAATCACTATAAGGGAGATAAAGCAACACCCATGGTTCTTAAAGAACATGCCTAGGGACTTAATAGAAGGGGAAAGAACAAGATATGAGCGTAACAAGCCAACTCAAACTGTGGGTGAAATCATGAAGGTAATAGAAGAGGCAAGAAGAGTAGCACCAGTTCATAAGCCAATTCAAAGTTCATCTTTTGCCTCTTCCGTAATCAATGTTGAAGCCTCTGATTCAGACTCTGAAATAGAGTATGTTGATGCGGAGGGTAGTGGCGAGTTTCTTGAACTTGATATATGCAAGTATTAA

Protein

Gene

>g440833.t1
ATGGAACAAAGATACGAGCCATTAAAAGAATTGGGTGCAGGCAATTTTGGCGTTGCTAGATTGGTTAGAGATAAGAGAACTAAAGAGTTGCTTGCTGTTAAGTATATCGAGAGAGGCAAAAAGGTCCCATTTTTAAGATTCTTTCTTGGTTTTGATAAATGGATTTTGTTCAAGTTTTAATTTTGGTTGAGTTGCTTGGAAAAAGATCGCTTTTTTAGTGTTGTTTGTAGAATATCTGTACTATGAGTACCAGATTTTCGATTAAATGCCTGCTTCGTTTTGGATTCAGATTGATGAAAATGTAATGAGGGAGATAATCAACCACAGTTGTTTAAGGCATCCTAATATAATTCGATTTAAGGAGGTAAGCGGACATTTGCCAATTTACACATTTACTCTGTTATGCACAGTAATATATTTTATTGAAATCTTTGTTTGCAGGTTTTATTGACACCGACACATTTAGCTATTGTTATGGAGTACGCAGCTGGAGGCGAACTATTTGATAGAATATTAACGGCTGGCAGATTTAGCGAGGATGAGGTATTAAAGAAAATACTTCATACTTAATTTTCCATATTTACATACTGTGGTTATGAACTCATATTCATAAGCAGGATTAATATTTTATGTTTTCGACAGGCAAGGTATTTCTTTCAGCAACTGATATCTGGTGTCAGTTACTGTCATTCAATGGTGAGTTGCTTTATATGCTTTTTTGAGTTCAGTAATGTATATAGCAAGGGAACATAAGAATACTCAATGATATTCATTCCAATATTGTAGGAAATTTGTCACCGTGATCTAAAATTGGAAAACACGCTCTTAGATGGAAGTCCAATACCACGTCTTAAGATATGTGATTTTGGTTACTCAAAGGTATATACTATCAGTTTCCATAGTTTGGTCTGAACTTGGTTTAGAATATTGCTAGATTTCTAATAGTTAAATATGTTATGAATATTGCAGTCAGGTTTATTACATTCGATGCCAAAATCTACAGTGGGGACTCCAGCTTACATTGCACCGGAGATTCTTTCACGAAGAGAGTATAATGGCAAGGTATCCTTCCACTTTCTAGCTCGTATGGTTATTCGCATGTTAGATTTAAATGTGAAAACATTCAATGATTATGGATGGAGACTTCATAAATGTTGTCATTTGCATGGGTGTATGAGTTATTTGATAATAATTGCACCAAACTTTGGATAAACAGTTCGATACCATTCAGCTGTATTGATCGAGCCTTTTATAATTTTAAAAGTTTGAATTTTTGTCCTAAGCAGAATGCAGATGTTTGGTCATGCGGTGTGACGCTATATGTCATGTTGGTTGGCGCGTACCCTTTCGAGGATCCAGCAGATCCTAGAAATTTTAGGAAAACGATTGGTGTAAGTTAATTATTATCTGTTTCAATCCTTGATTTTAAAGAATATGTCGATGTCATGATACTTCAAAAGAAGAAAATTCCAAATAATCTTGGGTCATTGCAGAAAATTATGAGTGTTCAGTACTACATCCCTGATTATGTTCGAATATCTCCTGCTTGCAAACACCTTCTCTCTCGAATTTTCGTAGCCAACCCATACAAGGTAATTTTTCATGTATTCTTACAGAAAATTTCAGATTATATATCACTTATAGTATATGAAATAACATTGTATTTACATTTTTTTTTTTTCATTTCATCAGAGAATCACTATAAGGGAGATAAAGCAACACCCATGGTTCTTAAAGAACATGCCTAGGGACTTAATAGAAGGGGAAAGAACAAGATATGAGCGTAACAAGCCAACTCAAACTGTGGGTGAAATCATGAAGGTAATAGAAGAGGCAAGAAGAGTAGCACCAGTTCATAAGCCAATTCAAAGTTCATCTTTTGCCTCTTCCGTAATCAATGTTGAAGCCTCTGATTCAGACTCTGAAATAGAGTATGTTGATGCGGAGGGTAGTGGCGAGTTTCTTGAACTTGATATATGCAAGTATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241649.1	2.4e-162	serine/threonine-protein kinase SAPK3-like
Swissprot	A2ZAB5.2	1.1e-140	stress-activated protein kinase 3
trEMBL	A0A8B7CA40	2.4e-148	serine/threonine-protein kinase SAPK3-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G08590.1	74.43	6e-139	490	ASK2;ASK2;SNRK2-1;SNRK2.1;SRK2G	SNF1-related protein kinase 2.1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g440833	AT5G08590.1	309	76	1	4	309	3	311	74.43	6e-139	490
g440833	AT1G10940.1	307	68	2	4	306	3	309	76.55	2e-138	488
g440833	AT1G60940.2	307	69	2	4	306	3	309	76.22	2e-137	485

Ortholog group

Species	Genes
Allium cepa	g440833.t1
Allium fistulosum	AfisC2G01147
Allium sativum	Asa5G00500.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	5	261	234.3	1.4e-69

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14498	SNRK2; serine/threonine-protein kinase SRK2	EC:2.7.11.1	MAPK signaling pathway - plant	ko04016
K14498	SNRK2; serine/threonine-protein kinase SRK2	EC:2.7.11.1	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network