result

Gene information

Detail information of g44260


Location
GeneChrStartEndStrand
g44260CHR3235868540235874175+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_029117135.11.1e-55uncharacterized protein LOC105033396 isoform X3
SwissprotF4IXE7.16.2e-29Repressor of silencing 4
trEMBLA0A835DFP64.4e-56PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G14920.133.811e-57 222Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag44260.t1; g535925.t1
Allium fistulosumAfisC2G02329
Allium sativumAsa5G02116.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF16135.2JasFamily77384280.85.5e-23

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0051276Pchromosome organization
GO:0000118Chistone deacetylase complex
GO:0000122Pnegative regulation of transcription from RNA polymerase II promoter
GO:0000228Cnuclear chromosome
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000785Cchromatin
GO:0000790Cnuclear chromatin
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003682Fchromatin binding
GO:0051726Pregulation of cell cycle
GO:0034728Pnucleosome organization
GO:0042623FATPase activity, coupled
GO:0003824Fcatalytic activity
GO:0017111Fnucleoside-triphosphatase activity
GO:0004386Fhelicase activity
GO:0005488Fbinding
GO:0046872Fmetal ion binding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005654Cnucleoplasm
GO:0005694Cchromosome
GO:0005700Cpolytene chromosome
GO:0043231Cintracellular membrane-bounded organelle
GO:0016887FATPase activity
GO:0006323PDNA packaging
GO:0006325Pchromatin organization
GO:0006338Pchromatin remodeling
GO:0006355Pregulation of transcription, DNA-templated
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0006996Porganelle organization
GO:0007063Pregulation of sister chromatid cohesion
GO:0007276Pgamete generation
GO:0007283Pspermatogenesis
GO:0008150Pbiological_process
GO:0008270Fzinc ion binding
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009987Pcellular process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010564Pregulation of cell cycle process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010629Pnegative regulation of gene expression
GO:0010639Pnegative regulation of organelle organization
GO:0010948Pnegative regulation of cell cycle process
GO:0016043Pcellular component organization
GO:0016462Fpyrophosphatase activity
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0016581CNuRD complex
GO:0016787Fhydrolase activity
GO:0016817Fhydrolase activity, acting on acid anhydrides
GO:0016818Fhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0017053Ctranscriptional repressor complex
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019953Psexual reproduction
GO:0022414Preproductive process
GO:0030261Pchromosome condensation
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031491Fnucleosome binding
GO:0031974Cmembrane-enclosed lumen
GO:0031981Cnuclear lumen
GO:0032501Pmulticellular organismal process
GO:0032504Pmulticellular organism reproduction
GO:0032879Pregulation of localization
GO:0032880Pregulation of protein localization
GO:0032991Cmacromolecular complex
GO:0033043Pregulation of organelle organization
GO:0033044Pregulation of chromosome organization
GO:0033045Pregulation of sister chromatid segregation
GO:0033046Pnegative regulation of sister chromatid segregation
GO:0035327Ctranscriptionally active chromatin
GO:0042766Pnucleosome mobilization
GO:0043044PATP-dependent chromatin remodeling
GO:0043167Fion binding
GO:0043169Fcation binding
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043228Cnon-membrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0043233Corganelle lumen
GO:0043933Pmacromolecular complex subunit organization
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044427Cchromosomal part
GO:0044428Cnuclear part
GO:0044446Cintracellular organelle part
GO:0044451Cnucleoplasm part
GO:0044454Cnuclear chromosome part
GO:0044464Ccell part
GO:0044703Pmulti-organism reproductive process
GO:0044877Fmacromolecular complex binding
GO:0045786Pnegative regulation of cell cycle
GO:0045875Pnegative regulation of sister chromatid cohesion
GO:0045934Pnegative regulation of nucleobase-containing compound metabolic process
GO:0046914Ftransition metal ion binding
GO:0048232Pmale gamete generation
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0048609Pmulticellular organismal reproductive process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051098Pregulation of binding
GO:0051101Pregulation of DNA binding
GO:0051128Pregulation of cellular component organization
GO:0051129Pnegative regulation of cellular component organization
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051253Pnegative regulation of RNA metabolic process
GO:0051312Pchromosome decondensation
GO:0051704Pmulti-organism process
GO:0051983Pregulation of chromosome segregation
GO:0051985Pnegative regulation of chromosome segregation
GO:0060255Pregulation of macromolecule metabolic process
GO:0060341Pregulation of cellular localization
GO:0065007Pbiological regulation
GO:0065009Pregulation of molecular function
GO:0070013Cintracellular organelle lumen
GO:0070603CSWI/SNF superfamily-type complex
GO:0070615Fnucleosome-dependent ATPase activity
GO:0071103PDNA conformation change
GO:0071824Pprotein-DNA complex subunit organization
GO:0071840Pcellular component organization or biogenesis
GO:0071922Pregulation of cohesin loading
GO:0071923Pnegative regulation of cohesin loading
GO:0080090Pregulation of primary metabolic process
GO:0090545CCHD-type complex
GO:0090568Cnuclear transcriptional repressor complex
GO:0097159Forganic cyclic compound binding
GO:1901363Fheterocyclic compound binding
GO:1902494Ccatalytic complex
GO:1902679Pnegative regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903507Pnegative regulation of nucleic acid-templated transcription
GO:1903827Pregulation of cellular protein localization
GO:1903828Pnegative regulation of cellular protein localization
GO:1904949CATPase complex
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:2001251Pnegative regulation of chromosome organization
GO:1905634

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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