Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g449603 | CHR7 | 210725402 | 210740366 | + |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020258162.1 | 3.2e-253 | lysine-specific histone demethylase 1 homolog 1-like |
Swissprot | Q6Z690.1 | 6.4e-222 | Protein LSD1-LIKE 1 |
trEMBL | A0A8K0ISS1 | 1.3e-232 | Lysine-specific histone demethylase 1 |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT1G62830.1 | 64.85 | 0.0 | 767 | ATLSD1;ATSWP1;LDL1;LSD1;SWP1 | LSD1-like 1 |
Species | Genes |
---|---|
Allium cepa | g449603.t1 |
Allium fistulosum | AfisC7G02194 |
Allium sativum | Asa3G03112.1 |
Arabidopsis thaliana | AT1G62830.1 |
Oryza sativa | LOC_Os02g51880.1 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF04433.14 | SWIRM | Domain | 292 | 369 | 47.9 | 1.1e-12 |
PF01593.21 | Amino_oxidase | Domain | 394 | 826 | 302.8 | 5.1e-90 |
Accession | Ontology | Name |
---|---|---|
GO:0051276 | P | chromosome organization |
GO:0005622 | C | intracellular |
GO:0005575 | C | cellular_component |
GO:0008152 | P | metabolic process |
GO:0005623 | C | cell |
GO:0005634 | C | nucleus |
GO:0043231 | C | intracellular membrane-bounded organelle |
GO:0016570 | P | histone modification |
GO:0006325 | P | chromatin organization |
GO:0006464 | P | cellular protein modification process |
GO:0006476 | P | protein deacetylation |
GO:0006479 | P | protein methylation |
GO:0006807 | P | nitrogen compound metabolic process |
GO:0006996 | P | organelle organization |
GO:0007275 | P | multicellular organism development |
GO:0008150 | P | biological_process |
GO:0008213 | P | protein alkylation |
GO:0009987 | P | cellular process |
GO:0016043 | P | cellular component organization |
GO:0016569 | P | covalent chromatin modification |
GO:0016571 | P | histone methylation |
GO:0016575 | P | histone deacetylation |
GO:0018022 | P | peptidyl-lysine methylation |
GO:0018193 | P | peptidyl-amino acid modification |
GO:0018205 | P | peptidyl-lysine modification |
GO:0019538 | P | protein metabolic process |
GO:0022622 | P | root system development |
GO:0032259 | P | methylation |
GO:0032501 | P | multicellular organismal process |
GO:0032502 | P | developmental process |
GO:0034968 | P | histone lysine methylation |
GO:0035601 | P | protein deacylation |
GO:0036211 | P | protein modification process |
GO:0043170 | P | macromolecule metabolic process |
GO:0043226 | C | organelle |
GO:0043227 | C | membrane-bounded organelle |
GO:0043229 | C | intracellular organelle |
GO:0043412 | P | macromolecule modification |
GO:0043414 | P | macromolecule methylation |
GO:0044237 | P | cellular metabolic process |
GO:0044238 | P | primary metabolic process |
GO:0044260 | P | cellular macromolecule metabolic process |
GO:0044267 | P | cellular protein metabolic process |
GO:0044424 | C | intracellular part |
GO:0044464 | C | cell part |
GO:0048364 | P | root development |
GO:0048731 | P | system development |
GO:0048856 | P | anatomical structure development |
GO:0051568 | P | histone H3-K4 methylation |
GO:0071704 | P | organic substance metabolic process |
GO:0071840 | P | cellular component organization or biogenesis |
GO:0098732 | P | macromolecule deacylation |
GO:0099402 | P | plant organ development |
GO:1901564 | P | organonitrogen compound metabolic process |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
K11450 | KDM1A, AOF2, LSD1; [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase | EC:1.14.99.66 | Thermogenesis | ko04714 |