result

Gene information

Detail information of g456110

Location

Gene	Chr	Start	End	Strand
g456110	Scaffold_82944:HRSCAF_466030	361460	362194	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	ONK79049.1	5.9e-46	uncharacterized protein A4U43_C01F2350
Swissprot	Q8H3Q1.1	2.7e-32	Protein FRIZZY PANICLE 2
trEMBL	A0A5P1FPY3	4.2e-46	AP2/ERF domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G18560.1	75.00	3e-35	145	PUCHI	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g456110	AT5G18560.1	96	14	3	28	113	41	136	75.00	3e-35	145
g456110	AT5G13910.1	60	7	0	40	99	19	78	88.33	4e-28	121
g456110	AT1G12890.1	79	27	1	26	103	5	83	64.56	1e-25	113

Ortholog group

Species	Genes
Allium cepa	g456110.t1
Allium fistulosum
Allium sativum
Arabidopsis thaliana
Oryza sativa	LOC_Os07g47330.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	43	89	43.9	1.8e-11

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0001067	F	regulatory region nucleic acid binding
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0040007	P	growth
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0009791	P	post-embryonic development
GO:0009889	P	regulation of biosynthetic process
GO:0009891	P	positive regulation of biosynthetic process
GO:0009893	P	positive regulation of metabolic process
GO:0009908	P	flower development
GO:0010015	P	root morphogenesis
GO:0010022	P	meristem determinacy
GO:0010073	P	meristem maintenance
GO:0010101	P	post-embryonic root morphogenesis
GO:0010102	P	lateral root morphogenesis
GO:0010432	P	bract development
GO:0010451	P	floral meristem growth
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0010557	P	positive regulation of macromolecule biosynthetic process
GO:0010582	P	floral meristem determinacy
GO:0010604	P	positive regulation of macromolecule metabolic process
GO:0010628	P	positive regulation of gene expression
GO:0044212	F	transcription regulatory region DNA binding
GO:0045935	P	positive regulation of nucleobase-containing compound metabolic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0022414	P	reproductive process
GO:0022603	P	regulation of anatomical structure morphogenesis
GO:0022622	P	root system development
GO:0031323	P	regulation of cellular metabolic process
GO:0031325	P	positive regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031328	P	positive regulation of cellular biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0035266	P	meristem growth
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043565	F	sequence-specific DNA binding
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048364	P	root development
GO:0048367	P	shoot system development
GO:0048507	P	meristem development
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0048527	P	lateral root development
GO:0048528	P	post-embryonic root development
GO:0048589	P	developmental growth
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048827	P	phyllome development
GO:0048831	P	regulation of shoot system development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051173	P	positive regulation of nitrogen compound metabolic process
GO:0051239	P	regulation of multicellular organismal process
GO:0051252	P	regulation of RNA metabolic process
GO:0051254	P	positive regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0060688	P	regulation of morphogenesis of a branching structure
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0090567	P	reproductive shoot system development
GO:0097159	F	organic cyclic compound binding
GO:0099402	P	plant organ development
GO:1900618	P	regulation of shoot system morphogenesis
GO:1901363	F	heterocyclic compound binding
GO:1902680	P	positive regulation of RNA biosynthetic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:1903508	P	positive regulation of nucleic acid-templated transcription
GO:2000026	P	regulation of multicellular organismal development
GO:2000032	P	regulation of secondary shoot formation
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0090696
GO:0090697
GO:0090698
GO:0140110
GO:1905392
GO:1905428

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network