result

Gene information

Detail information of g456466

Location

Gene	Chr	Start	End	Strand
g456466	Scaffold_82986:HRSCAF_466072	668132	671767	+

Sequences

CDS

Protein

Gene

>g456466.t1
ATGAAAAGATTGTTATTCACACTGCTGATTCCTTCGATTCTCATGGTGGCTAAAGCAGATTTAGTTGAAGCTGGCTCAGTTTGCAATGAAAAATGTGGCAAATTTTCTATCGAATATCCATTTGGAATTCGTGAAGGATGCTATCGTGATGGCTTTAATATTTCTTGCAATTATACTAATGGCACCTACAAACCTTACCTTTCTAATACAGAGATTATTGGCATTTCAATTCATCCACCTCAAATGCGCATCTACAATGCGATTAGTTATGCTTGCTATAACATCAGTGGATTGCGTGACCGTGGTAAAAGATACCGTCTCAACTTCAAAAACACAATATATCGGTTTTCAGATACTCATAATAAATTTACGGCTATTGGATGCAGAACTCTTGCATATATTCAAGATTATTCCGATGACAGTGATCCATACATGAGCGGCTGCTTATCATTATGCAGTAGAAACAGCAGTGCCATCGATAAGGCTCCATGTTCAGGAATGGGTTGCTGCCAAACTTCGATTCCTAAAGGCATGACGTTCTACAATGTCAGATTCGATCCTGGGTTTAATCACAGCAGTGTTGCGGATTTTAGTCCATGTAGTTATGCATTTCTTGGTGATCAGGACTACATTTTCAATTCGTCGGATGTTCATATGGATGAGTTCAGCAAAAGGAACGAGAAAGGCATGCCTATTACGCTTGATTGGGCTATTGGGAACAATGGTTGTGCAGAGTCAATTCATGATAAGGATTATGCTTGCCGTAGTGAATACAGCTATTGTGTGGATTCTGTTAATGGACCAGGTTATAATTGCAATTGTTCAGTTGGTTTCCAAGGAAATCCATATACACTAGGAGGATGCAGTGGTTAGTATTATCCCTTTGACTTATCTTATTATTATTAAGAGAACTAATTAGAAACAAATATCATGCTCTAGTAAAATTAGCAAAGATGTCCACTTTAATGTGAATCTGGATATGAATGCTTGAATGCAAAAAGTTCAAATAGTTTGATAAGTTGAAAATCATTGCTGCTTTAAAGATTTATCTAATGCCTGTTGCAGCATGTGGGATTATAAAATTATCTGTTAAACCTATTTGTTTGATTATGTGAATAATTGGCAAAACAGATATCGATGAATGTAGAAACAAGACACAAAATAACTGCTATGGAGAATGTCATAATGTCGTGGGAAGTTTTACGTGTAAATGCCCATCTGGACATGAAGGAGATCCTTTTCAGCAAGGAGGTTGCCGACCGAAACCAAAATTGTTGCTGCAGCTGCTACTTATAGGTATTTTTTCTAGCTAAACTATTTTTTTTTAAAGCCCAGGAGAACCCGACGGGCCGGTAAACTCCTGAGGAGGGTATAGTAAAGCCGTCCGCTGATTCAAGCTCCATACTACCTGGTAAATTTATATAGGATAGGGAAGCGCATGGTAGGAATCGAACCTGTGTCTTTTTAGCAGAACTCAAGCCTCATTTCCATTGCGCTGTACCTGCGGACTAGCTAAACTAAATTGATCCTATAATTTCTATGTTAACAATATAAAACTGAAAATGACCATAAGTGAATTATGAAATCAAATGATCCATATCAATGGATGCATTTTAGTACTTTAAAACAGTAACAAGGCTCAAATGCATCAATTGATCATGATCAGATACTTCAGATACGTTGTTTTTTTTGCGAGAAAGTATTTGTTCTTAGCAAGAGTTGCAAAATATATATATGAACACTTCTAAGTAACTTATCTTTCTTTCCTTTTTAATGTGCAGGTGCACTTAGCATTTTCTTGATCGCTGCTGTTGTTTATCTTGTATATGAAAAGACGAGATTGAGCAGAGCTAAACGAAACTGTTTTAGACAAAATGGAGGTCTACTATTGCAAGAACAAATCAGTGCACATCAATGTGTAAGGTTCAAAATATTTCCTGCAGAAGAAATAAACAGAGCTACAAACAGCTTTCATGAAGCTCAAATTGTTGGACGTGGGGGCCAAGGCGTTGTCTATGATGCAATTCTCGATGATAAGAGAAGGGTTGCCATTAAAAAGTCACTAATGATAGACGAGAAGAAAAAGAAAGAGTTTGCCAAGGAAATGTACATACTTTCTCTCATCAATCATAAAAATGTGATTCAAATTTTGGGTTGTTGCTTGGAGGTTGATGTCCCTATGTTAGTGTATGAGTTCATATCAAGAGGCACACTTTACCAACTTATTCATAATAAAAATCAGTCCATATCGTATAGTTTACGACTGAAAATAGCTGCAGAATCTGCATCAGCGCTTGCATATCTACATTCAGATGCTTTCCCTTCAATTGTTCATGGCGATATAAAGTCTTCGAACATTTTACTTGATGATGAATATAATGCAAAAGTTTCTGATTTTGGTGCTTCATTTTTGCCTCTAAATTATGTAAATGAAACCGGTGTACCTGGTACTTACGGTTACTTGGATCCAGAGAGCCTACTAACCGGTCAACTGACTCAAAATAGCGATGTTTATAGCTTTGCAGTTGTAATTTTAGAGCTTCTTACAAGGAAAAAGGCGGTTTATACAGATGCGCTAGGTGAGAAAAAGAATCTTGCACAAACATTCATAGTTCAAGGTCTCGAAAAAATATTAGATGAAGGAATCAAGAATGAAATGAGTCGGAAGCAAATTATAGAATTGGAGGGAATGTTGAGGTTGAGTTTAAGAGAAGTTGGAGAAGAAAGACCGGCTATGACTCAAGTGGCGGCATTTCTTCGTAGAATGAAGGATTCAAATAGCTCAGTATTAGAGGAAAGCAACTTTGAATATGCAAAGTATATGGACGGGGAGTCCAGTTTGGACACAACTCATATCACATCTGCATTTTGTAGTTCAGATAGTCGAACAACTTTTCAATTTGATTCTAGGCTTACTAGATAGTACTGATACATTTTTTGAATAGCTATACTGTAATAAATGTGTGCATTCATCATGTTCATCAAAATATGATCTAAAAAAAGAGATGAAAAATTACTGAAGAACAGGTGTTGAATTTGCGACTATATGTTATTCTACAGAAAGTGCACTTGTTCCATTAGGACCATTGCATAGATTGACGCACCTTTCATTTATGTAACAATTATGGTGACTTCTTTCATTTTTACAGCCTCTCTTTTCCACTGATGGGGATATATTTGCTTATCCTTTTGGTAAGTGAAGTAGGCCGACTACACGAGGTATTGCTCCACTCGTTCAGTATCTACTTACCATCCAGTCTATGCAACGAAAGAACTGTCCCTATAGAAAACTGCTGTTCAAGGATGTTTGGGTCATGGAGATGAACCTTACCTTTAAAGTAACTATGCGCCTGCGTGGCTATCAACATTTTCAAGATTATGGATGTGTTTTCCAAATTTTAAGGTTTAGTATGTTTTTTAATCTACAAGTAGTATGAAGGACATTTCAAAAGCAAAAGTTGGCTGTATGTAGATAACCTTAAAATATGCTGATATAATTATTGTCAAAAATCTCCTCCTTTAAAATCACACAAAATATGTATGAAGGTTGATATTATTTCTTATTACTATTGTTACAGCTCTAACTGTGGTCGAAAGAGTTCGATGTGCCACCTAGCCACGGCGTCGTGCCCATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026657217.1	2.9e-166	LOW QUALITY PROTEIN: putative wall-associated receptor kinase-like 16, partial
Swissprot	Q9LMP1.1	2.9e-107	Wall-associated receptor kinase 2
trEMBL	A0A804HY64	6.9e-162	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G21270.1	37.92	1e-119	427	WAK2	wall-associated kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g456466	AT1G21270.1	691	386	22	8	674	7	678	37.92	1e-119	427
g456466	AT1G21230.1	698	383	23	8	674	7	682	37.54	2e-115	414
g456466	AT1G21250.1	725	397	27	23	720	27	722	37.52	3e-115	412

Ortholog group

Species	Genes
Allium cepa	g456466.t1; g483485.t1; g483489.t1
Allium fistulosum	AfisC1G04919; AfisC1G07355; AfisC1G07356; AfisC2G05419; AfisC3G03929; AfisC3G06081; AfisC3G08024; AfisC3G08039; AfisC3G08840; AfisC4G06007; AfisC6G06463; AfisC8G00200; AfisC8G04787
Allium sativum	Asa7G00218.1; Asa7G06017.1; Asa7G06032.1; Asa7G06040.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13947.3	GUB_WAK_bind	Domain	27	130	90.6	9.2e-26
PF07645.12	EGF_CA	Domain	290	322	28.1	1.5e-06
PF00069.22	Pkinase	Domain	408	666	136.4	9.8e-40

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network