result

Gene information

Detail information of g458925

Location

Gene	Chr	Start	End	Strand
g458925	CHR3	21907898	21914900	+

Sequences

CDS

>g458925.t1
ATGGAAACATTGTTAAAAGTGTTATCTCAAAGTTGCAGTGAAGGCAACGAAGACAAAGGTCGTGAGACAAATACTGAAAAAAGAGAAAAGGATGATCAACTACAGTCAAACTTAAGTGAAATGAAAGAAGAGAACGAAAGACTAAAGATGATGATATCGCGAATCATGAATGATTCTCAGTTGTTGCAAACGCGAATATCAAAAATTGCTTCAAGTGAACAATCTAAAATGGATACTAAAAATTTTGCTAGTCATATAAACCACCAAGAGCCCCATGAATTTGTCACACTGAGTCTTGGTTCAACGTACGTTGAGAGCAGAAAAGAAAAATTAAAGTCACTTAAATCGAAGGAAGACGTAAGCACTGTTGACGAAAGTTTAACTCTTGGACTTGATGAATTTGTAAATGCTAAAATGCAATATGTTTCAAGTTCTAGTCATGAGGAAACTAAAAGCCATGAAAATAAGGAGACATGGCCTCCGAGCAAAGTAGCCACACTGAGAAATGAAGATGATGAAAGTAATGCTCTGTTGAGCGATTCTGCAAAGAGAGCTAGGGTTTCTGTTAGAGCAAGATGTGACGCCCCAACTATGAATGATGGATGTCAATGGCGAAAATATGGGCAAAAGGTATCAAAGGGAAACCCACGTCCTCGAGCTTACTATCGATGCACAGTTGCACCAAATTGTCCAGTAAGAAAGCAGGTGCAAAGATGTAAAGACGACGTGTCTGTACTGATAACTACATATGAAGGCACACACAACCATGTACTTCCAGTCTCAGCCACGGCCATGGCTTCCACCACAGCTGCTGCTGCTTCAATGCTGTCTTCTGGCTCCGGTGTCTCAAGGCAAAATGCTGCATTTTCCTTCGCATCCGAAGTTGCTTCGACGAGTAGTAGCTTTCAGAACATGGATCAGAATCGGTTTTACTTGCAAAATCAGTTGATGTCGACATCTTCTTTGCATCCTACAGTCACTTTGGACCTCACCACTCCAAGGCAAAGTACATACAAGAACTCTACATATCCATGGAACCTGAGCTATTGGCAAAGACATGCTAACACACCACTCAACTCCAGCAGCCTCAACATATCAAACGACATCATTGCAAAAGCAATCACGTCAGATCCCAATTTCCAATCAGTACTGCATACAGCTATATCTTCATATGTCACAACAGGCAGTAACAATGGAGTTCAGGAAACTAGCACATCCCAGAAACTCACAAATTCATTCACATTTGATCAAGGCAGTGAACACGAATGA

Protein

Gene

>g458925.t1
ATGGAAACATTGTTAAAAGTGTTATCTCAAAGTTGCAGTGAAGGCAACGAAGACAAAGGTCGTGAGACAAATACTGAAAAAAGAGAAAAGGTACAATTCATCTTTCCCTTATTATTAGCTACTTTGCACCGTAATGATATAATTGTTTCCACTGAAATTTCTCATATTATGAGCTTCTTAACAGGATGATCAACTACAGTCAAACTTAAGTGAAATGAAAGAAGAGAACGAAAGACTAAAGATGATGATATCGCGAATCATGAATGATTCTCAGTTGTTGCAAACGCGAATATCAAAAATTGCTTCAAGTGAACAATCTAAAATGGATACTAAAAATTTTGCTAGTCATATAAACCACCAAGAGCCCCATGAATTTGTCACACTGAGTCTTGGTAGGACTTTTTTTTTTGTTTTTTGTACGAACATAGATTGTGGACTTAAATTAATGGAACTCGCAATATATTTTTCCAGGTTCAACGTACGTTGAGAGCAGAAAAGAAAAATTAAAGTCACTTAAATCGAAGGAAGACGTAAGCACTGTTGACGAAAGTTTAACTCTTGGACTTGATGAATTTGTAAATGCTAAAATGCAATATGTTTCAAGTTCTAGTCATGAGGAAACTAAAAGCCATGAAAATAAGGAGACATGGCCTCCGAGCAAAGTAGCCACACTGAGAAATGAAGATGATGAAAGTAATGCTCTGTTGAGCGATTCTGCAAAGAGAGCTAGGGTTTCTGTTAGAGCAAGATGTGACGCCCCAACTGTATGCACCATTTACTTCTTTTTTTTTCTTTTTGGTGCATTTGAGTTCATGTGCATGCATGAAGTTTCGTTAATGTTTAGGCAATTATAGCTGTGTTATAGAGTTCTTCTGTCTATCAGACTGAAAGTATAATGGTCATCTGCATCCTAGCTCATTTTGATTATGAATTTTATGATATATTTGCCTTGAACTTTAAGAACAACTTTTGATTTGTATATGGGGATACGTCAAAGAAAGATAGAAAATTATTGGTTAATATGTTCATTCAGTATAATAGTACATTGAAAGTTCGGATTATATATGGCTTATAAACAGATTTTACATTTTGAAAAACTTTGCAGATGAATGATGGATGTCAATGGCGAAAATATGGGCAAAAGGTATCAAAGGGAAACCCACGTCCTCGAGCTTACTATCGATGCACAGTTGCACCAAATTGTCCAGTAAGAAAGCAGGTAGTAATCTTTACACAAATGATACCTTCAAATCCTTTTTCAAAGCTTCTTGCTTACTGTTCATGATATGATACTTTTTACAGGTGCAAAGATGTAAAGACGACGTGTCTGTACTGATAACTACATATGAAGGCACACACAACCATGTACTTCCAGTCTCAGCCACGGCCATGGCTTCCACCACAGCTGCTGCTGCTTCAATGCTGTCTTCTGGCTCCGGTGTCTCAAGGCAAAATGCTGCATTTTCCTTCGCATCCGAAGTTGCTTCGACGAGTAGTAGCTTTCAGAACATGGATCAGAATCGGTTTTACTTGCAAAATCAGTTGATGTCGACATCTTCTTTGCATCCTACAGTCACTTTGGACCTCACCACTCCAAGGTATTCTAACATTTGAGTCCATGTTTAGCTGTAGTTTCTGATCTTTTATCATTTATATATAAAAGTTATATATTTGCTGGGTTATCGCAAATATTTGTAAAGTTTTCCACTAAAACGCTGAAACTTTAAGAAAATGGGCTCTGCAAATATTCATGGAGAACTCTCCACACATTTGCAGGAAACTCCACAAATATTAAGGCTCCCTTTGAGAGAACTCCATAAATATTAAGGCTCCGTTTGAAAGTTTTGTGGTACCGGTTAAAAAAGCTTTTGGAAGTACCGGTTTTGATCATCAATGATGATAGCGGTTTTGGTTGGTTTACATTAAGTGTTGTTATAACCGATCTATACATGTTTGAGAGTTTAACATACACCGGTTTTGTGAGTTTTCCACTAAAGTACCATTACATATATATCTTTATATTTTGTGGAGATTAATTCTATAATATAATTAGTTGTTGTATAATTGAAAAAAAAAAATTATAATCCCTCAAAAACACCACAATTTAATGGTTGAGAATTGCTATAAAAATTAAACTGCATCGGTTTTCACCAATTTTATAAACAACAATTGGTGTGGAAAAAAAAAATTACAAGCAAAGTTATGATAACACTTGAAATACAGAACCGTTCAAAATCAGTCAAAACCGGTAGAAAATTAACTCTTAAGCGGAGTCTAAAAGTTTTTGAACTGTAAATATTCGTAAATGACTTTGCAAATATTTGCAAATTTGATATTTGCATAGTTCTCTTCCATATTTGCTTTTATTAAAAAAAAGATTTGTCTTGATTATAAAAATATACTGTTGACGTATAAATTTAATTTTCAAAAAATGCTGAAAAATACATTTATCCAAATTAAAAATGAGATTGTGATTTAAAAAATAATTCTGGAAAGGGTTTTTCACTTAATAAAACTGAAAATAAGAGATGAAACAGAAACTTCAACTTTTATATACTACGCATGAAGTTATCTATGTGAAGTCAAAACTCACAAGTGTAATAGTAAGTATTCTAGTTTTAAACTTGAATGTTTGAAAAATGTTCACATTTGCTACTAGCTAGCAACAAACTAGTTACAAAGACTTTTAAAGCATATGTGCTAGTAGCTCCAAAACGAAAAAGGATAAATTTAAGACACAGTTAGCTGTTATAAGTGCATAGTAGAATTTTGGAAGCCAGATTTAGGTTGATCATACTGCATATTTACATAGACATGCATTTCATTCATTAGGCATGGATTGTTAAGGTTTAACTGCTAAAAACCTATCAAATGAAAGAGGTTGCCGAAACGTTTTTTCTAAGATTTTATATCACATATAGTTTCTAATAAAAATAGCATAACAACCCACAAAACTACTAGTATGCTGAAATTCAAACGAACAAACCCGACACAGGCAAAAAATTTACAATTATTTATGATTAATATGTTGGAAATTGTAGGAGAATATTCAAACTCTAATATCACTATTGGAAAATTTCTATAAGAAAAGAAGGAGAGGGAACTGCTAATTTGTAAATGGAGAGTAAGAGAAAATTTTGTAAAGAAAGAAATAAGTTTTGTTCTTCTTTCAATTTTTTTTTTGCTTACATACAATTACGTTTGTTTGCTTGCATACGTTAAATAACAGAGCACATCTCAATTTATAATAGAGTATATTCTTTATACATTTCTTCAACATCCTAATTTTTAATTTTTTCTTAACAAAATATTTTCTAGAATTCTTCAAATTACTTATTTGATAACTCTAGATTTTTCTCTATTCTTAATTTGATATTTACATAAATACAAAGATTATAATTGTTAATATAATCAAAGTTTTCTAAAAAATAAGTTTATTTCCACCATAATATATCAAACATAATAGACGACCAATAAGTGGATCATCATTTGGAAGAAAAGATTAACAAATGAATCGTATCAGTAATCTAGATTGAACGAATCTTACACGTTGTGGCAGTGGCTTATTTTGTTGGGAGAATGTAATTTGAATTCCCATGTACTCAATATTAGTTGGTAATATAACAGGATATATATTAAATAGAGAAAATACAAGTACATAAAGATAGCTTTGAGGTAAATTCTATTTAAAACCAGCAACACGCAGAATATGCCTCCAAACATTGAAAAACCAACCCTTGTTTTGCTGAGTTGTTCCCTAACGGAAAAAATTTCAAAAAATACCATTCCACGCGTGGCTCTACGTGTTGCTCTGAAAGCACCACGTAGAGTCATTACGTGGTACCGTTAGAGTACCACGCAGATCAAAGGAGTGGTGGACATAAATTTTGAAAAAAAAAATTAACACAAATTTAAACAACCTTTAATTTTTTTGTAAAAAATAGAGAGGCAACTCAGCAAGTTACAGGATTCAAATAGAATTTACCTAGTTTTGAAGATCAAATCGTGAGGCGAACTGTGTTGGTGCAAAGTCAAAGATTCTAGTGGTTGATCAATATTTTCTATTTCTCTGATTTAAATGTAAAATTATTTTAATTAATATTAAAATTTAACCAACTATAATTAATATATTGAACTTTAAAACAATTATTCTTAAATAGTTCATAACAAGTATTAAATGAAACAATTTTATAATAATTTTTTTACCGTAAATTTATAAAAATGTATAATGTTGCCTAAAATCGATAAAATAATCCAATAATTTTGTGGCTAAGGTTACGAAATTGTTTGTTAAATTGATTATTTGAAGAAGAAAAAATGAAGAATAAAGGTATATTTTTTCTCAAAATTGAAGAACCGTATGATTTTAGGTGGTTGGTGCAGAGGTTTTTTCAAGATTTTAATATTATACCGTGGGTTTATACACGCACAATGTTATTTTATTGCTAGAGCCATAGTGCTCTAACATTGAAGGTTAAATATGATCGAATCGAGATTGGATTGGGTTTTTTAAAACAATTGGTTTAGGCATATTTAATGGGTTGTGATTCCCTTTAACACAAAATCACATGTTTAGTACGCACTAATCTAGTGGAATGACATTAAACTAAAATGCGGATCTACAGGGTTTGGGTTCATCAGCACTTATCACATACTAGAAGATATACTCTTCCCTTCATTCAAGCTGTCTTAACAAAATGAACATAAGAAAGTGACGTAATCTAATAGAATGACACAACCCCTACAGTCTTTAATGAGTAAATTTTAGTAGTATACGCGAAAGAAAAACTTACTTCAAACTTTAGACATCTTTAAAAAAGATTATAAAAATAAGTCTATTTTTCATTAAATCCATATTTTGTGATTGTGAAGTTTGAAAATACATAAGCATGATAAAACTTTATGTCTCACCGTCCTTTGTTCTTGAGTTAAATACTACAATTTTGTCCGTCCTTGAATCAACAATAAACCACTTTAATCTATCAAAACTAGATACCAATGCCTACAAGTGATGAATTTCTCATCATGAAACACTTCATGCTAGTTAACCTCTTAAGTGTTCATAGTATCACAAATATCTTCATACCACCTTTGTGGATTTTGTAACTCAATACTCGTTCATAACTAGATTTAAGCTCACTACGATCATCATTAATACTTTGAGCATCATTCCATCAGCAAGATCAAAGCGATGCTCATGTTAATCTATGTATCTAATTGTGAACTAGCCTCTCCAACCGTGATTTGCTTTCCACTGTTGGATCCCATAACTTTCAAATCTATAAGAAAAATCCATCCAATGTTCTCAAATCACCACACAACCTTTTTTTTTTAACCTCACAAAGTTTCTACTTTGAGTCTCATTGGTGCAACCATAGTGATTTAATTGACCAAGATAAATTAGTTTATATGAATGTCTCTGTCCGAGGCTCTCTACCCACACCATCACGTTGATAATTTCGAACACATACAATACTACAAGGAATTTGAAAACGTATACAATAGCTGCGTTTGCGACGAAGGAAACTTACTATTTGAATGGTGCATTTGAGCGTGAAAGTTGAACGAATGAGGAATACGTTTGCAGCTACGAATGTGATATTTGAGCGGAGTATTTACGTTGTGATTTTTAATTTAATTGATTTATAGTTTACTAATTAATTATTTGTTTTTTAATAAATAATATGTGAAAATAGTTTGCAAAAATAAGTAAATAAATAAATTGAAAAATTGTAAATTGTTCAGATACAATTCAAACAAATTTCATAATGTAGAGCACTTTGCTACGATAGCAAAGCAAAAAACCAAGTCTCAAACGGACTTCATTTGCACAAGTCATTAATTTAAAAAATGTATAAAAATATAAATTTTATTAATTAACGTAATTAAAGCAGCTAACGTTGCAGAAATCATCATTCAGCAAAATGGTGAATTTGATCCGTTTAAGTTCGTGACGCGTCGGATGCGTCACGAACATGAACGGCTAAAATTTTTGTGTGAATGCATCCTCTATATGTTGTTTTTGAAAAAAAAACCAAAACAAAACAAAATTTGATTTGTGACGGCATTTAATTTTCACGCACTATACTTGAAGGTGCATATAATAGAGTGCTCCATCTTTGTTAAACTTCGTGAGCCATAGAAATTTCTGTTTCTGGGGAAGCAAATTGTTTTTGGAAACAAATTTTACATTTAGTCCCAAAAAATGAAACAAATTTCAACTTTTCTCCTTGTTCCAAATTTATTACAAAAATAGACTCAAATTCTAATGTGTAGAAAAACAGACTTATTTTTGCAATAAGTTTTGAATGAGGTCTAAATTTGAAACATGTTATTTTCTAGATTTAATCCAGCAGGTATCCATAGCTTTTTTTTCTATATCTGTTATTTTAGTTTTGAACAAATTTTGCTTATTGGTTCCAAAAAAAAAAAAAAAACACTAAAACTTCTTCAACTTGCTTCAAACAAAACTTATTACAAAAATAGATCTAATTTTTTACAATCCAAATTTGCGGAAGTGCACACACTTGTGCAATCTAAATTTACTCCAACACAAATTTTTTTTTTAAATTACGTTTGCGCAATCCAAATGTTGTCATATGCAAAAGAAGATATATTTTTGTAATAAGTTTTGAACGGAAACTAAAGTTGAAATAGGTTCTTTATTGTACTTATAACAAAATTTTGTCTTTTTAATTTTTCCTCTAACATCAATATTTTTCCAAACTAATACAGGCAAAGTACATACAAGAACTCTACATATCCATGGAACCTGAGCTATTGGCAAAGACATGCTAACACACCACTCAACTCCAGCAGCCTCAACATATCAAACGACATCATTGCAAAAGCAATCACGTCAGATCCCAATTTCCAATCAGTACTGCATACAGCTATATCTTCATATGTCACAACAGGCAGTAACAATGGAGTTCAGGAAACTAGCACATCCCAGAAACTCACAAATTCATTCACATTTGATCAAGGCAGTGAACACGAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_022751909.1	2.8e-59	probable WRKY transcription factor 72
Swissprot	A0A3Q7GFB5.1	6.8e-47	WRKY DNA-binding protein 72A
trEMBL	A0A6P5ZGN8	2.0e-59	probable WRKY transcription factor 72

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G15130.1	37.83	7e-62	234	ATWRKY72;WRKY72	WRKY DNA-binding protein 72

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g458925	AT5G15130.1	497	210	18	1	413	1	482	37.83	7e-62	234
g458925	AT4G04450.1	417	199	14	26	392	106	503	35.73	3e-47	186
g458925	AT1G68150.1	244	119	3	33	276	96	312	40.16	8e-44	174

Ortholog group

Species	Genes
Allium cepa	g458925.t1
Allium fistulosum	AfisC3G08111
Allium sativum	Asa2G06691.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	199	256	89.8	9.4e-26

Gene Ontology

Accession	Ontology	Name
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006952	P	defense response
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006950	P	response to stress
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network