Detail information of g461610


Location
GeneChrStartEndStrand
g461610CHR3234277586234286844+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAFR67541.12.2e-84LFY
SwissprotO04064.22.6e-29PTLF
trEMBLJ9U3M11.6e-84Floricaula/leafy-like transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G61850.155.082e-22 102LFY;LFY3floral meristem identity control protein LEAFY (LFY)

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag461610.t1; g71511.t1
Allium fistulosumAfisC5G06046
Allium sativumAsa4G05355.1; Asa4G05365.1
Arabidopsis thalianaAT5G61850.1
Oryza sativaLOC_Os04g51000.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01698.13FLO_LFYFamily1189163.38.5e-48

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0007165Psignal transduction
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0007154Pcell communication
GO:0046983Fprotein dimerization activity
GO:0007275Pmulticellular organism development
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0042802Fidentical protein binding
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009739Presponse to gibberellin
GO:0009740Pgibberellic acid mediated signaling pathway
GO:0009755Phormone-mediated signaling pathway
GO:0009791Ppost-embryonic development
GO:0009889Pregulation of biosynthetic process
GO:0009908Pflower development
GO:0009987Pcellular process
GO:0010022Pmeristem determinacy
GO:0010033Presponse to organic substance
GO:0010073Pmeristem maintenance
GO:0010074Pmaintenance of meristem identity
GO:0010077Pmaintenance of inflorescence meristem identity
GO:0010468Pregulation of gene expression
GO:0010476Pgibberellin mediated signaling pathway
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010582Pfloral meristem determinacy
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019827Pstem cell population maintenance
GO:0022414Preproductive process
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031490Fchromatin DNA binding
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0042221Presponse to chemical
GO:0042803Fprotein homodimerization activity
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0043621Fprotein self-association
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048367Pshoot system development
GO:0048507Pmeristem development
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071370Pcellular response to gibberellin stimulus
GO:0071396Pcellular response to lipid
GO:0071495Pcellular response to endogenous stimulus
GO:0080090Pregulation of primary metabolic process
GO:0090567Preproductive shoot system development
GO:0097159Forganic cyclic compound binding
GO:0098727Pmaintenance of cell number
GO:1901363Fheterocyclic compound binding
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.