Detail information of g462599


Location
GeneChrStartEndStrand
g462599CHR22836184928383542+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK71502.11.7e-214uncharacterized protein A4U43_C04F9310
SwissprotQ336M2.23.6e-198Cyclin-dependent kinase E-1
trEMBLA0A5P1EZY61.2e-214Protein kinase domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G63610.173.610.0 677ATCDK8;CDKE1;CDKE;1;HEN3cyclin-dependent kinase E;1

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Ortholog group
SpeciesGenes
Allium cepag462599.t1
Allium fistulosumAfisC2G09041
Allium sativumAsa6G00528.1
Arabidopsis thalianaAT5G63610.1
Oryza sativaLOC_Os10g42950.1; LOC_Os10g42950.2; LOC_Os10g42950.3; LOC_Os10g42950.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain18326230.12.6e-68

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0051726Pregulation of cell cycle
GO:0003824Fcatalytic activity
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004693Fcyclin-dependent protein serine/threonine kinase activity
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005654Cnucleoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0007346Pregulation of mitotic cell cycle
GO:0008150Pbiological_process
GO:0009987Pcellular process
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016592Cmediator complex
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019538Pprotein metabolic process
GO:0031974Cmembrane-enclosed lumen
GO:0031981Cnuclear lumen
GO:0032991Cmacromolecular complex
GO:0036211Pprotein modification process
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043233Corganelle lumen
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044428Cnuclear part
GO:0044446Cintracellular organelle part
GO:0044451Cnucleoplasm part
GO:0044464Ccell part
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0065007Pbiological regulation
GO:0070013Cintracellular organelle lumen
GO:0071704Porganic substance metabolic process
GO:0097472Fcyclin-dependent protein kinase activity
GO:1901564Porganonitrogen compound metabolic process
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K02208CDK8_11; cyclin-dependent kinase 8/11EC:2.7.11.22 2.7.11.23 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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