result

Gene information

Detail information of g464674

Location

Gene	Chr	Start	End	Strand
g464674	Scaffold_83767:HRSCAF_466853	231154	233495	-

Sequences

CDS

Protein

Gene

>g464674.t1
ATGCATCTTGAAGGAGGGGTTCTTGAGGAGGAAGGGAGCCTACCTTTAGGTCACAAGTTGTTTGAAGTTGGTTATGGTACTCAAATTATTTTCTGTACCAGGTAGGAATCTAGTCGGTGGAAGTCCAATTCAAGTCGATAGGAAGCTACTTCGGGTCAAAGGCGAAGGAACTTTAGGGAAGACTTCAAGTTGACGGAAGGAAGGGTTTAGGGGAAAAACATAGAATATTTTTAAGTATACTACTTGGTACCAACCTCTTTTAGTCGATACTGATCGCTTCGTTGGCTTTTGGAGTGGATCAGGTAACTTGGAAAGTGTGACACTGAGGAAAGGAGGCAAGCAAGGAGGGAAAAGGTCAGGATGTGAAAGACTTAACCAACCTTTTGGCTAAACAATTTATATTAGTATCGACCTAATCATATCAATACCAGTATGAATTGAAGAGGCTAATCTTGGCTAAATTTCGAGGGGATGCTCAGGGGTTCCTACAGACCTGTAGAAGGTGTTCGTTTGTTCATTTGAGGCTCGGTTGTGTTATGGTAGCACGATGAAGGATGATGGCTTCAAGACTTTGATAATGGTAACTTGATGGTCATGAAGTTATGTTTCAATTATGATAGCTCAAGGTTGAATGGAGTCGTGAGGATGATTATCCACAATGGTGGGTTCTAGGTTGGGTGATCCATGGCTAGTATGTTGAAAGGTTCTATCATGAAAATAAAGGAATAGGAATGGTTCCTTGAGGTTGAATGGAAACATGGAGTGAAGAAAGGGCTCAAATACACATGCTAAGGGATCGTTGATACTCAGAGTGTTTTTTGATGTGATCGTAAGCAAGGGTATTATGAGGACGCTCATTGGGTACTTGGAATGACTGCCATGGATCGATGGAATGGATCTGTATACCCAGGATCAGTGGAATAGATCTAGTGCCAGCAATATGCTGGTAGGAAAGTACACTGAAAATAGGAATTTTTTTCATTAGTGCTTTGTGGAGGAATGGTCATACGAGTTATCATATATTCAAGGTACAGTGAGTGACTTTGTGTAACAACCCGGATATTTTAACGGATTTAATTAATTTAATTAACTGAATTTGTGAGAAATGGTAAACGATAAAATTTTGGAATAAAAATTTAATATTTGAAACGCGTCTATTTAAACATAGCAACTGGTAAATTTTCGTCTAAAAATATGAAAGTTTATTTCGTGCGTAAATTTACTTCAATTTAATCAGTTAAAAAGCGATGAAAATAAAAACTTTCCGAAACCTAAATATTTTTACATAGAAAAATTCTAAATCATCTTCTGCGCAAGATGCTGTTTTTCGTTTTTCCAAATTCGGACATCTTTAGCTCCTTCGATCTTATTTTTCTATGTTTTTCATCCAATTTCCGCTAGTATAAAATTTCGAATTTTTATAATTCAATCATAGCACTGATATCTATATACCGTCTTGATCGTCTTGTCGTGCTGACCTCCGTAGTATATTCGTATGTGTGTTTCGACGTCCGGTGGACGGCGAAATCTGTAAACGTTGAACCGTATCGGTACTTATTTTTTAACCTTTTGATTTACCTTTTAGTTCATTACCCACTGAGTCACTAGCAATTATTATTTCTGAATTCAGCAGATGTCTTTTTACCTTTCCACATTAGTTCCAACGTTTTCTAAGTCCATTCGTTTATCCACTGTTAAGAAACCAACGGTCGGCAATTTTACTATTTTTGGAATGCACGAACTGACCTTTGGTTATCTTCACTTTCATTTTAATATATTTTCCTGTTGGAACTTTTCACCATCTCTCTTTTCTTTTGTCCCTGACACACGTTCCCCTCTCCTTCAGAGAAAGAAAATACAACTCATCAAATAATGTCTAATTTGATGCCAGATCCTTTGCTCACCATTTTCTTTTGAAACGTCTCTACCGCTCACCATTCACCACCTCTATTCCTCTCGCCCAGGCCATTTCCCATAGCAAGTGCCTCGGCCCTCTCCACCAGAGGCCGCCGCATCCGCATGCCGATCATCTGCGTAGCCGCGTCTTCCAGCTCACCCGCGAGCTTGGTCACAGATCCGACGGCCAGACCATCGTGTGGCTCCTTCGCCATTCCGAGCCTTCCATAATCGTTGCCACTGGCACCGGAACCACACTCGCCTCCTTCTCTTCCTCCACCCGAGCGCAGCCATCACCGCGAACCAACTCACCACCCACCAGCTACGACCGCGAATCTCGGCCTCCACAACGAGCCGATGCCGACCCTAATCCTGACCCTCTCCCTCATCCATCGCATGTGGTCGTACTTCTTCACTTCGGCCACCACAAAGCCTCGCTCGCCTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_031478236.1	8.7e-12	transcription factor TCP7-like
Swissprot	Q9FTA2.1	5.3e-14	Protein CHE
trEMBL	A0A5K1ADI1	6.3e-12	TCP domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G08330.1	72.73	4e-16	81.3	AtTCP11;TCP11	TCP family transcription factor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
g464674	AT5G08330.1	55	15	125	179	53	107	72.73	4e-16	81.3
g464674	AT5G23280.1	47	10	125	171	61	107	78.72	3e-15	79.0
g464674	AT3G47620.1	45	13	125	169	139	183	71.11	3e-13	72.0

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03634.10	TCP	Family	126	178	46.2	6.2e-12

Gene Ontology

Accession	Ontology	Name
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007623	P	circadian rhythm
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0048511	P	rhythmic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network