result

Gene information

Detail information of g468517

Location

Gene	Chr	Start	End	Strand
g468517	Scaffold_84206:HRSCAF_467292	70642	77398	-

Sequences

CDS

>g468517.t1
ATGAAGAAGAAGAAGAAGTGGTGTGGAGATAAAAAGAAAGGACGGGAGTTTTGTATGGTTAAATTAGCCGTCGGCGTTCGATGCTTCAAACACCAACGGACCATTCCTTTGCGTTTTTTGAACCGGACCGAGGAAGTTCCATTTATCAATATTCAAATCTCCAACTCCTTTTTCTCCTCACCTCTCCCTCAAAGCATTCAATTCAACATTTCATTAAGTCAACATAAACAAAATGCATTTCATATCAGTATCTCTTCTCACAATTTTCGTATCTCTCTAATGTCCTATTTTCTAACAACCATCGTCATCTTCGTCTTCCTCTCCATAACTAAATTCCCAACTTCATTTTCAGGCCAAGTCTCAACCCAATTCCTTTATCCTACAGAATTCACATCATTCCACTTCGTCGAAAACTCCGGAACCTTCCTTTCCTCCACCAACTCCATATTCTCCGCCAAATTCTACAATCCCGGTAACCATAAACCGGAAAGATACTACCTTGCAATCATTCACAATCCATCCAACACAATCGTTTGGTCAGCAAACCCTAATCATCCTCTTTCATCAAACTCCGTTCTTTCTCTTTCCAACTCTTCTCTTTCTCTGCATAACTCTAATGGCTCCGTCGTATGGTCCACTCCTTCATTCCCTTCTAAAGTTGACAAACTCCAGCTTCTCGATTCCGGAAACTTGATTCTTCTAGATAAGTCGGACACTTCTCTATGGCAGTCTTTCGATCATCCAACCGATACTTTACTACCTACACAGAAACTCGCTACCGGGTCCCTTTTAACAAGCCAGGTGTCGGGTGCAGACTTATCGGGTAGCGGGTACAGCCTTCTGGTCACCAGCAACGACGTGGTTTCGGAGTGGATGGGTACACAGCAGTACTGGAGCCTGTCTTTGGATCCCAAATCCATTAAAGATTACAGCGGCCAGGCTGCTTACATGCAGATAAACGGATCCGGGTTTTACTTGTTTGGTAAAGGGAACAGAATTGTGTACCAAGTACTGCTTCCGAACAGTAACGGGTTTCGGGTCGGAAAATTGGAGCATGATGGTAGGTTCAGAATCATCACTTATTCATCAGGGGATGCAAACATTGACTTCGTTGCTCCGGTAGATGGATGCGAGCTTCCATTCACTTGCAACACACTTGGGTTATGTCCTATCGGTACGAATATGTCCACGTGTCTCTGCCCGGATTCATTTAGACCCGATAAGGAAGGTGGATGTATTCCTACTGACGGGTCTGTTCTTCCTTCTACTGCTTTTTTGTGCAATTCGTCAAGTTCGAGGATATCATATTATGATCTAGGAAGTGGAAATAGGTATTTTGCGAACAAATATGCAGTGCCTACAAGGGGAAATGGTTTCTCTTCTTGCCAAGATGCATGTTCTAGTAATTGTACGTGTGTTGCTTTCTCATATATGAGTTCGACAATGTTGTGTTATTTAGTTTATGATCAACTAGGCTCTTTGATTCAAACCAAATCGACCGATAATCCGAATGGCTATGTTAAGGTGATCAAATCTTCTTCATCTTCATCGCCTAATCAAACTAGTGGTTCGCCTACCAACATTTTACCCATAGTACTTCCATTAGTTGCCACCACTTTGCTTGTGTTAGTTCTTTCGTTTGTGGGGATTCAATGGTGGAGGAAGAAGAAAAACAAGAAATTACTAGTAGCAAAGGCAAAAGCAAAAGCAAAATCTCATACTAATCTGTATAATTTAGGAAATCACAATTCTACGCAAGAAGATGATAGCAATGACAGCGAAGAAGAGTTCTCAATCCCAGGTCTTCCTATGCGATTCACTTACGAACAGTTGGACTTAGCTACCAACAAATTTCAGACTTTGATAGGATCGGGCGGGTTTGGATCCGTTTACAAAGGCGAACTACCCGATAAGAGCCTTATCGCGGTCAAGAAAATCACCAACATAGGAATAGCAGGTAAAAAGGAGTTTTGCACTGAAATAGCTGTTATTGGAAAAATTCACCATGTGAACCTGGTTAAACTTAGGGGCTACTGCGCCCAGGGCTCGAACAGGCTGCTGGTGTACGAGTACATGAACCGAAGCTCATTGGACCGGCCCTTGTTCGGGCAAGGCCCGGCCTTGGAATGGCAGGAGAGGTTGGACATTGCGATAGGAGCAGCTAGAGGGCTGTCCTACCTGCACTCGGGTTGCGATAACAAGATACTGCACTGTGATATAAAGCCCGAAAACATTCTTTTAGCGGATTTCAACCAGGTCAAGATAGCGGATTTCGGAATGGCCAAGCTGATGACTCCGGAACAGTCCGGACTCTTCACGACCATGCGCGGGACCCGGGGGTATTTAGCCCCCGAATGGCTGTCGAACACGGCTATATCGGACAAAACGGATGTTTACAGCTATGGGATGGTGTTGCTTGAGATAGTGAGAGGTAGGAAGAACAGGTACAGTGCTAGTGGGGATAGCGGGTTTAGTGGGTCTAGCGGGTCCAATATGGAGTACTTTCCGATGGTGGCGGTTGAGAAGCACGTGGAGGGTAAATGGGCCGAGTTGGTGGACCCGAGAATGGGAGGACGTGTTGTGGGGGAGGAGGTGGAGAGGGTGGTCAAGGTGGCGTTGTGCTGCTTGCATGAGGAGCCATGGAACAGGCCGAGCATGGCTATGGTAGTCGGGATGCTGGAGGGTACTATGGGTGTATGGGAGCCTAAAGTGGAGGGCCTAAAGTTTTTGAGGCTGTATGGACGAAGCCCAGATGTGAACAGTGAAGGCGTGGTTTGCCAAGAGGAAGGGAGTAGTTCTATAAGCATGTCGTTGATGACGTATGTTTCATCTCAAGAAGTTTCGGGGCCGAGGTAG

Protein

Gene

>g468517.t1
ATGAAGAAGAAGAAGAAGTGGTGTGGAGATAAAAAGAAAGGACGGGAGTTTTGTATGGTTAAATTAGCCGTCGGCGTTCGATGCTTCAAACACCAACGGACCATTCCTTTGCGTTTTTTGAACCGGACCGAGGAAGTTGTTGCCCAATTCAGACATCTAACACTTTCGATATGTCTGAAGTCAAAACTGGACTGAAGAAGTCTGCGAGTGCACCCTTAACATTTGCCCTTAGGATACATAATTACATCCCAAAAAATGGATATGTGGATATTGCTCAAGTCATCACTAAAAACCAACATTGCAGTTTGAAATTGTTGTTATCCTAAGTATATAATTAGGTGTTTGCGCAAAAAATGGGCAAACACCTCAAAGTCGTACGATTTAGTTGATTATATGTTGTTCTTAGTGATTTGGGTGATTTATGCAAATATGTAAAAAGCAGGGACTAAACTGTAAAAGACACACAGATTTATAGTGGTTCGGCCAGAACGTGCCTACGTCCACTTTATATGTTATTCTCCTTTTTCTCTTCAGATTACAAGTACAAAGCTTTGTATACAAGTATATGAATGTTGTTTGAAAGTTCTATCCGTGCTTGAGCTCTCAAACTTGTCTGCCATTGTTGTACCCCTGCCCCTCTATTTATAGAGTGAGGCTGGGGGCAGGGGTCCTGGATGTATATAGCTGCTGGTGGGCCTGGGCTGAAGCAATCTAGCCTGGCACATCTGGTTCGGCGGAGCTTTTGTTCGGTCGTAGCTGGGATGGTTGGACCCGGTGGTAGGTTGAGTGGAGTGTTGGTCCGGTGGTAGGTAGAGTGGGTTTGGACCGGTGGAGCTTGGTCCGGTGGAGGTGATTCGGTGGAGCTCGTTCGGTAGTACATGGAAGTGTGGTTGGTTCGGCTAGGAAGGGAAGTGGAGTTGGTTCGGTGATGAGTTGGGAATGCCGAATGCTTCTATATTTGGGAGTGCCGAATGAGCTCTTGTATTGGGAACGCCGGATGAACCAAGGCATCTTGAATGCCGAATGAGACTTCGCTCTACATTGCCGAATGAAACTTTAAACCTTTGATACCGAATGGACTTTTATACTTGAGTCACTAGTGAAACCCCAGACTTATATACGCTTGCTGGCTGCTTCTTCTTGGTGGTCGTGGTGGAAACGCACACAACACTGATATTCCAGTTTTGACCAAAAATGGGATAACACTTTGCCCCCAAAACATGCCTTGCAGTAGGAAGGCGTGTTTTGTAATGCCATGAGCTGGATGTTCATATCCTGTTGATGTCCTCATGCCTTGCGGTAGGAAGGCGTGTTTTTGTAATGTCATGAGCTGGATGTTCATATCCTGTTGATGTCCTGCAAAGAGCTTGATATTTTATATGGCCCCAAATGACGACCGTTCGGGATCGAGCTATTTGGGATGAAGCGCGGCCGTTCATGGTCAAGCGCCTAACTTCAAATGACGACCGTTCGCGATCGAGTCATTTGAGGTGTAGTGCGACCGTTCGGTCAAGCGTCTAAATCCATGCGACGATCGTTCGAGATCGAGTCATTTGCGGTGGAATGTGATCGTTCACGGTCAAGCGCTTTACTTCAAATGACGACCGTTCGGATCGAGCCATTCGAGGTAAAGTGCGACCGAGCCCGGTCAGAGGGCGGACCTCAAATGGCGATCGTTCGCGATAAAGCCACTTGGGGTGAAATGTGACCTTCACGGCTGGTGCCGTTTGCGGCAAAGATGAAATGGGACCGTTCGCGGTCAAGCGCCTTACTTCGGATGACGATCGTTCGAGATCGAGCCATTCGTGGTAAGGTGCGACTGTTGGCGGTCAGGGGGTGGACCTCAAATGGCGACCTTTCGCGATCGAGCATTTTGTGGCGAGATGAGTTGTGCCGTTCGAGGCGAGTGTTGTGACCGTTCGAGGTCGGGTGCCGTTCGAGGCGAGTTGCGACCGTTCGAGGTCGGGTGCCGTTCGAGGCGAGTTTGCGACCGTTCGAGTCGGGTGCCGTTCGAGGCGAGTTTGCGACTGTTCGTAGTCGGGTGCCGTTCGAGGCGAGTTTGCGACTGTTCGTAGTCGGGTGCCGTTCGAGGCGAATTGTGTGTGCCCGAGGGGGACTTAATATTATCAGTTTCGAAGTTATTGTTTGGGGGAGTTTTCGAATCAAAGACTTCGGCAGTTCACTGCCATGCAAGAGGTGCTCGTGGACCGTTCGCGATCCAATGGGCATACAACTAAATTTGCAAATATCAAAGCAATAATCATACGAATTCCATAACAGGAATGTTCAAGTCAAGATCAAAGCAAGAGCAAGACGAGGATGTCAAAGTGTAAACTCTTACTATGGTGCGGTCAGTAGTCATTCAGAGCATGCCTATGGATCGTGCGCGATCGCTTACATGTGTAAATGATCTAACCGTGTTAGGAGAGGTTTGCGACTTGTTCATCTCTTTCGACCTGCCCCCCCCGAGTTCAGGAGGAATTTTACCTGCCCCTGGATGAGCGTTCATTCCTTACCAGGTTGCTCAGAAGCCCATATCTCTCTCTCTGAGATTGGATCAACATGCTCCAAGTGTGGTGCCCCATGCAGGATCGATGCCTGATTAGCTTCTGAAGAAGCCTCTTGATTTTCCTCCATGTTCACATCTCTCTGGCCTTGGCCTTCTGCTTGATTGTCTCGCCATGACTCTTCCAATCTGAATCTCTAAACTCTCAAATTCAATTCCAAGCGGTAGAATCCTTGAGTTCAATTCTCAGTGAAAGCACCAAAAATGTTTGCGCAAAAATGGGCAAACACCTCAAAGTCGTACGATTTAGTTGATTATATGTTGTTCTTAGTGATTTGGGTGATTTATGCAAATATGTAAAAAGCAGGGACTAAACTGTAAAAGACACACAGATTTATAGTGGTTCGGCCAGAACGTGCCTACGTCCACTTTATATGTTATTCTCATTTTTCTCTTCAGATTACAAGTACAAAGCTTTGTATACAAGTATATGAATGTTGTTTGAAAGTTCCTTCCGTGCTTGAGCTCTCAAACTTGTCCGCCATTGTTGTACCCCTGCCCCTCTATTTATAGAGTGAGGCTGGGGGCAGGGGGTCCTGGATGTATATAGCTGCTGGTGGGCCTGGGCTGAAGCAATCTAGCCTGGCACATCTGGTTCGGCGGAGCTTGGTTCGGTCGTAGCTGGGATGGTTGGACCGGTGGTAGGTTGAGTGGAGTGTTGGTCCGGTGGTAGGTTTGAGTGGAGTGTTGGACCGGTGGAGCTTGGTCCGGTGGAGGTGATTCGGTGGAGCTCGTTCGGTAGTACATGGAAGTGTGGTTGGTTCGGCTAGGAAGGGAAGTGGAGTTGGTTCGGTGATGAGTTGGGAATGCCGAATGCTTCTATATTTGGAGTGCCGAATGAGCTCTTGTATTGGGAACGCCGGATGAACCAAGGCATCTTGAATGCCGAATGAGACTTCGCTCTACATTGCCGAATGAAACTTTAAACCTTTGATACCGAATGGACTTTTATACTTGAGTCACTAGTGAAACCGCAGACTTATATACGCTTGCTGGCTGCTTCTTCTTGATTCGGTCATGGTGGAAACGCACACAACACTGATATTCCAGTTTTGACCAAAAATGATATAGCATTAGAGATTTTCACTCAAAGGTCTTTTTTGTGCAGGGTAATAATTTTAAGAACAACACTTCTGAAAATTAGTTTTAAAAACAATATACAAAAAATGATAAATAAAGTTATCATTTCTAGATATACAGAAATAATGATAAGTGAGTTAGGAGTCGGGTTATAAATAGAATTCGTCACACTATAGAAATAAATAGAAAAAACCCACTGATTTTATCGTGTTTTGTTCAGGCTGGGGTGAACAAAATAGAATTCCTTAAATCATATTGATCTCCATGACAGATGACACAGAAATAAAATCGGCTCATGATGCGCGATACCTCAACCACTTTCAATATTTTTTTAATCAAACGCGCAGCAAATTCAAGCGTTAATTCAAGCATTTCCCACCTCAATGACATCAGCCATTTATCAATATTCAAATCTCCAACTCCTTTTTCTCCTCACCTCTCCCTCAAAGCATTCAATTCAACATTTCATTAAGTCAACATAAACAAAATGCATTTCATATCAGTATCTCTTCTCACAATTTTCGTATCTCTCTAATGTCCTATTTTCTAACAACCATCGTCATCTTCGTCTTCCTCTCCATAACTAAATTCCCAACTTCATTTTCAGGCCAAGTCTCAACCCAATTCCTTTATCCTACAGAATTCACATCATTCCACTTCGTCGAAAACTCCGGAACCTTCCTTTCCTCCACCAACTCCATATTCTCCGCCAAATTCTACAATCCCGGTAACCATAAACCGGAAAGATACTACCTTGCAATCATTCACAATCCATCCAACACAATCGTTTGGTCAGCAAACCCTAATCATCCTCTTTCATCAAACTCCGTTCTTTCTCTTTCCAACTCTTCTCTTTCTCTGCATAACTCTAATGGCTCCGTCGTATGGTCCACTCCTTCATTCCCTTCTAAAGTTGACAAACTCCAGCTTCTCGATTCCGGAAACTTGATTCTTCTAGATAAGTCGGACACTTCTCTATGGCAGTCTTTCGATCATCCAACCGATACTTTACTACCTACACAGAAACTCGCTACCGGGTCCCTTTTAACAAGCCAGGTGTCGGGTGCAGACTTATCGGGTAGCGGGTACAGCCTTCTGGTCACCAGCAACGACGTGGTTTCGGAGTGGATGGGTACACAGCAGTACTGGAGCCTGTCTTTGGATCCCAAATCCATTAAAGATTACAGCGGCCAGGCTGCTTACATGCAGATAAACGGATCCGGGTTTTACTTGTTTGGTAAAGGGAACAGAATTGTGTACCAAGTACTGCTTCCGAACAGTAACGGGTTTCGGGTCGGAAAATTGGAGCATGATGGTAGGTTCAGAATCATCACTTATTCATCAGGGGATGCAAACATTGACTTCGTTGCTCCGGTAGATGGATGCGAGCTTCCATTCACTTGCAACACACTTGGGTTATGTCCTATCGGTACGAATATGTCCACGTGTCTCTGCCCGGATTCATTTAGACCCGATAAGGAAGGTGGATGTATTCCTACTGACGGGTCTGTTCTTCCTTCTACTGCTTTTTTGTGCAATTCGTCAAGTTCGAGGATATCATATTATGATCTAGGAAGTGGAAATAGGTATTTTGCGAACAAATATGCAGTGCCTACAAGGGGAAATGGTTTCTCTTCTTGCCAAGATGCATGTTCTAGTAATTGTACGTGTGTTGCTTTCTCATATATGAGTTCGACAATGTTGTGTTATTTAGTTTATGATCAACTAGGCTCTTTGATTCAAACCAAATCGACCGATAATCCGAATGGCTATGTTAAGGTGATCAAATCTTCTTCATCTTCATCGCCTAATCAAACTAGTGGTTCGCCTACCAACATTTTACCCATAGTACTTCCATTAGTTGCCACCACTTTGCTTGTGTTAGTTCTTTCGTTTGTGGGGATTCAATGGTGGAGGAAGAAGAAAAACAAGAAATTACTAGTAGCAAAGGCAAAAGCAAAAGCAAAATCTCATACTAATCTGTATAATTTAGGAAATCACAATTCTACGCAAGAAGATGATAGCAATGACAGCGAAGAAGAGTTCTCAATCCCAGGTCTTCCTATGCGATTCACTTACGAACAGTTGGACTTAGCTACCAACAAATTTCAGACTTTGATAGGATCGGGCGGGTTTGGATCCGTTTACAAAGGCGAACTACCCGATAAGAGCCTTATCGCGGTCAAGAAAATCACCAACATAGGAATAGCAGGTAAAAAGGAGTTTTGCACTGAAATAGCTGTTATTGGAAAAATTCACCATGTGAACCTGGTTAAACTTAGGGGCTACTGCGCCCAGGGCTCGAACAGGCTGCTGGTGTACGAGTACATGAACCGAAGCTCATTGGACCGGCCCTTGTTCGGGCAAGGCCCGGCCTTGGAATGGCAGGAGAGGTTGGACATTGCGATAGGAGCAGCTAGAGGGCTGTCCTACCTGCACTCGGGTTGCGATAACAAGATACTGCACTGTGATATAAAGCCCGAAAACATTCTTTTAGCGGATTTCAACCAGGTCAAGATAGCGGATTTCGGAATGGCCAAGCTGATGACTCCGGAACAGTCCGGACTCTTCACGACCATGCGCGGGACCCGGGGGTATTTAGCCCCCGAATGGCTGTCGAACACGGCTATATCGGACAAAACGGATGTTTACAGCTATGGGATGGTGTTGCTTGAGATAGTGAGAGGTAGGAAGAACAGGTACAGTGCTAGTGGGGATAGCGGGTTTAGTGGGTCTAGCGGGTCCAATATGGAGTACTTTCCGATGGTGGCGGTTGAGAAGCACGTGGAGGGTAAATGGGCCGAGTTGGTGGACCCGAGAATGGGAGGACGTGTTGTGGGGGAGGAGGTGGAGAGGGTGGTCAAGGTGGCGTTGTGCTGCTTGCATGAGGAGCCATGGAACAGGCCGAGCATGGCTATGGTAGTCGGGATGCTGGAGGGTACTATGGGTGTATGGGAGCCTAAAGTGGAGGGCCTAAAGTTTTTGAGGCTGTATGGACGAAGCCCAGATGTGAACAGTGAAGGCGTGGTTTGCCAAGAGGAAGGGAGTAGTTCTATAAGCATGTCGTTGATGACGTATGTTTCATCTCAAGAAGTTTCGGGGCCGAGGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010916822.1	7.7e-235	G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370
Swissprot	O65238.2	1.8e-188	G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370
trEMBL	A0A6I9QXV4	5.5e-235	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G35370.1	43.24	0.0	686		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g468517	AT5G35370.1	888	431	24	104	951	18	872	43.24	0.0	686
g468517	AT4G32300.1	853	451	25	131	951	36	821	35.52	3e-126	450
g468517	AT1G34300.1	786	432	27	145	902	44	765	33.33	4e-95	346

Ortholog group

Species	Genes
Allium cepa	g349896.t1; g468517.t1
Allium fistulosum	AfisC3G01061; AfisC3G05941
Allium sativum	Asa2G01097.1; Asa2G01098.1; Asa2G01123.1; Asa2G04936.1
Arabidopsis thaliana	AT5G35370.1
Oryza sativa	LOC_Os02g52850.1; LOC_Os09g28180.1; LOC_Os12g44320.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	175	261	79.1	2e-22
PF08276.8	PAN_2	Domain	455	491	25.2	1.2e-05
PF00069.22	Pkinase	Domain	620	890	165.3	1.6e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0005516	F	calmodulin binding
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network