result

Gene information

Detail information of g470321

Location

Gene	Chr	Start	End	Strand
g470321	Scaffold_84415:HRSCAF_467501	164009	165568	-

Sequences

CDS

>g470321.t1
ATGGAGTACCAGATCAAGAGCTACGGTTATCTGGCAATGGAATATCAAAAATTGAAGGATTCAGAAAAAGGTGCAGACTCAGAGTTATGGCATGCTTGTGCTGGAAGTATGGTGAAAGTGCCAGCAATCAACACTTTAGTGTACTACTTCCCCCAAGGTCATGCTGAACATGCTCGATTTCCCCTTCACAACCTTCACAATATGAACGAGTCTCCCATGCTTTGCCGTGTAGTTTCTCTAAGGTTAATGGCTGATCCTGAAACCGATGAAGTTTATTTCAAAACCCGCCTAGTCCCCGTAAAGCAAAATCCTGGAGCTTTCGATGATACACCAACTGAAGTACCCAAAATACCCTTATGGTTCACAAAAACTTTGACACAATCCGATGCAAACAATGGAGGAGGCTTTTCAGTGCCTAGGCAGTGTGCTATTACGGTATTTCCAAACTTGAACCGCCAAGATGACCCTCCAGTCCAAAGCATATCTTGCATAGATGTGCATGGAGAGACATGGACTTTTAGACACATATACAGAGGGTCGCCTAAAAGACATTTGTTAACCACCGGTTGGAGCACGTTTGTGAGTCAAAAGAAGCTCGTGGCTGGTGATTCCATTGTGTTTTTAAGGAAGGAGAATGGAGAGATTCATATAGGAATAAGAAGGATGAAGCCTTCTTATACTTGTACGAAATTCCTTGGTTTTAACAACAGTGAAATGTTCGGTAGGAGGACAAGGAAGGAGTCCATAATGGAGGCAGTAAAGAATGCGTCGGGTGGACAGGTGTTTGAAGTAGTGTACTATCCAAGGGCAGGTACCCCAGAATACGTTGTGAAGGCAGAAGTAGTGAGAGAGGCAACGATGATACCGTGGTGCTCAGGAATGAGATTCAAAATGGCAGTTGAATCGGAGGATCAGTCAAGGATTAGTTGGTTTATGGGAACTGTTACTGGGGTAGCTGATAGGCAAAAGTCACTATGGAAACAACTAGAGGTGAGATGGGAAGACGCAGGAAGACTTCTGGAAGATGTAAAGAGAGTGAACCCATGGTCGGTGGAGCCAGTTTCGAGCATGTACATGCCAACTATACATTTGGACAAAAAGCCATGCTTGCGGTTGCCTCCTTATGATCATTTGTCTTCTATATCTCCTTTGATCTTCAATGGCCACCAAATACAGTTGCCATTACCACAACTGCAGTGCCCTGCAATTTCAGGCATACAGGGATCCAGGCATGATAACGAATACACTAGTAAATTCACTGCCACTGCTGCCACAAATAAGCGCAAGAGCAGTTTTAGGTTTAGGGATGATGATGTAGGTAAGGATGATATAGCCTGTGAACTAACAATTGGAGTTGGCCATGTAACTGCTGCTGCTGCTAGTACTTCTGCTCCTGCTGCTGCTGCTGCTTTTATGCTATTTGGGAAGACAGTAGTGAACAACGCAGAAGAGGAACAAATTGCTCATGTTAGCAGTTCTGAGAACGCAAACCGTGCATCTTCATCATCTGACCGTGAAGTTGATGATAATGCGTTGCATCCCATGATTAAGTTCATATAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	RVW38797.1	2.1e-109	Auxin response factor 18
Swissprot	Q9SKN5.1	7.0e-102	Auxin response factor 10
trEMBL	A0A438DTG8	1.5e-109	Auxin response factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G28350.1	42.13	2e-102	369	ARF10	auxin response factor 10

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g470321	AT2G28350.1	553	226	17	20	487	2	545	42.13	2e-102	369
g470321	AT4G30080.1	551	233	16	21	497	12	542	40.65	2e-101	366
g470321	AT1G77850.1	384	173	8	26	372	17	395	44.01	1e-81	300

Ortholog group

Species	Genes
Allium cepa	g470321.t1; g470322.t1; g494753.t1
Allium fistulosum	AfisC3G06607; AfisC6G02605; AfisC6G02609
Allium sativum	Asa4G01035.1; Asa4G01037.1; Asa6G04464.1; Asa7G04862.1; Asa8G00284.1; Asa8G04095.1; Asa8G04106.1; Asa8G04108.1; Asa8G04111.1; Asa8G04128.1; Asa8G04129.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02362.18	B3	Family	121	221	72.3	2.2e-20
PF06507.10	Auxin_resp	Family	252	328	81.5	3.4e-23

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network