result

Gene information

Detail information of g471949

Location

Gene	Chr	Start	End	Strand
g471949	Scaffold_84617:HRSCAF_467703	288825	293345	+

Sequences

CDS

>g471949.t1
ATGAGCGAACATGGAATATACTCGAGAGAGAGGCTTCTGATCCCCAGTAGCAGCATCAACATTCTAAGTAATAGCACATGCTTTATCGAAATGGATTCTTATGCAAAAGAGAACCTTAAAAACTACTTTTGGAAGAAGAGGAAGAATCAAAGTTTATCAACATCGTCTAGACTCAATTTATCAAGCAATCATCAACATAACAGTCCTATAAGTGTCCATGTGGCTTTTGCTAATGCTCCAAATAGTTCATTGTCGAGTCCATCTAGATGTCCAAGGCGAATAATCAGCCCTGATCAAATTCCTACATATGCTTTCATGGCAGGAAATCCCTACCAAGATGTGACATTTCTTGGATCGGGTCAATGTTCTACTCTAAATTTAGATCAAACGTTCGGTCACAATTCTGTAGGTGGAGAAATGCTTGGACAATTATTATGGTGTCAAAGTAAAGGGAGTGCAGACTGTTCTCTCATACCTAACCCTAGAATGATAAGCCCTGGTCATAGTTATAGAATACATGATGAAGCTATACCCCATTGCATCCACGTGCAAGCAGAACTGCTCCAGGATTACCAACAAAGCAGAGCCATCTCTGGGGAAAATGGAGAACCCACTCAGTCCAAGTTCATGCTAGAAAAAAGGGAAGATGATTGGATGAGGTATAGCTCATATGGATGTGAAGTGGATAATATTTATGTAAAGAATGGTATTTATAAATTAGGTGATTTCGGTTGTGCAACCCTTCTGGATAAAAGTCTTTCGATAGAGGAAGGAGATGCACGGTACATGCCTCGAGAGCTGTTGAATGATACGTTTGAGCACTTGGATAAAGTCGATGTATTTTCACTGGGTACAACTGCTTATGAGCTTCTGAAAGGGTCTCCATTACCTGATTCTGGCCCTCAGCTTTCTTATCTTAGAGAAGGCAAGATCGCTTTGCTTCCTGGGATTTCTATGCAGTTTCAGTGCTTACTCAAGGCAATGAGGGACCCTGATCCAGCTAAACGTCCTTCAGCCAAAGAAATCATTGAAAATCAATATTTGAGAAGGGATGCAAATTCTTCTGTTAGTGATGATGTGCCTTCCTCTATTGATTCCCCATCGTTCGTTGACGAAATCGACAACCGTTTTCTCCGACGAACTTCACTCCTCGACCTCTCCACCCCGGACCTATGA

Protein

Gene

>g471949.t1
ATGAGCGAACATGGAATATACTCGAGAGAGAGGCTTCTGATCCCCAGTAGCAGCATCAACATTCTAAGTAATAGCACATGCTTTATCGAAATGGATTCTTATGCAAAAGAGAAGTTGCAATTCTATACCTTGATGAAAATGGGTTCCCTAAAATCTCTATTGCTTCCTTAGCCTTAAAAACTACTTTTGGAAGAAGAGGAAGAATCAAAGTTTATCAACATCGTCTAGACTCAATTTATCAAGCAATCATCAACATAACAGTCCTATAAGTGTCCATGTGGCTTTTGCTAATGCTCCAAATAGTTCATTGTCGAGTCCATCTAGATGTCCAAGGCGAATAATCAGCCCTGATCAAATTCCTACATATGCTTTCATGGCAGGAAATCCCTACCAAGATGTGACATTTCTTGGATCGGGTCAATGTTCTACTCTAAATTTAGATCAAACGTTCGGTCACAATTCTGTAGGTGGAGAAATGCTTGGACAATTATTATGGTGTCAAAGTAAAGGGAGTGCAGACTGTTCTCTCATACCTAACCCTAGAATGATAAGCCCTGGTCATAGTTATAGAATACATGATGAAGCTATACCCCATTGCATCCACGTGCAAGCAGAACTGCTCCAGGATTACCAACAAAGCAGAGCCATCGTCTTCCATTACCGCCTAACAATGTTAATAAAATATGTCCTTATTCTACTAATACCATCCAGTCAAGTACTTCTTCGTCAACACCATGGAGTCTGGGGAAAATGGAGAACCCACTCAGTCCAAGTTCATGCTAGAAAAAAGGGAAGATGATTGGATGAGGTAGTTTTGGCAATGTTAATGCTGGATTTAACGGGTATGTATTTTTGCTCATAATCTTTTTGTATTCATTTTCTGTTTGAATTACCTTCATCTTCAAGATTATCCGAAAGTCATCTAGCCTGTGTAAATGTTGCCTCGGTTTTAATGAGGCAATCACCCTCAGTTTTAACTGAGGATGTCAGCCTTATTTAACACTAAGCCTCACTTAATACCGAGGTAAATATTTTTTCTACAAAGGTAGATAGTATAATTGCTGATTGAACTTCGATTTGTAACTTGAAAAGTATACTAGATTTTGTCATTCTATTGTAAAATCGCTTGTACATAATATATATATTATACCACTTTATTATAAATATCAATAAAATGCAATTAATATTATATGTTGATCACATAGGTATTGCAAGTGTTTTGGATGGATACAAAGAAATTGGCAAGTTGAAACACCTACAAGAAGTTGGAAAAAACCATATATGCCTTGGCTACTTGGGGAATTGCTCTGCCAGGTAAATGCAATGGGTACTGTATTTGTATTTTCCTTAGTAGAAATTACTCTTATCATACTAAATATGTACCTAAATAATTGCATTCAAAATATACAAAGCTTATATTTAATATGGGGAAAGTCATAGGTGACACTCTCTCTTTTGCTTTAAGATCAAATCTAATATTGATTGCTTACCTCAAACACCTTTATGCTGAATTTTGATTGTTGTAGGCGAGGTTTAAATTTGGATTTAGATTTGGCACAAAAACATTAGTTTTTCAACAAATGAGTGGTATTTGGCGGCGTCAAAATGTAGATTAGTTTGGAAACTGGTACAAGCAAAGTCTATGGAGGAAAGGCTTCAGTTGAACCAGCTAACATCAAATGTATGAACGAGTGGAATAAATTTATCAAGTTGAAAACAAGTTTGGAATTTAAGGTATTTTTTATAAACAACACTCATTTATGTATTATGTCGTAGGGATAATATTACATTAAAATTATGGATAATATTTTAAAATCTCTTATTTCAGGCTTTGAGCGAAAAGAATGAAGCTATTAGACAGAAGTAGTTGCCACACACATGCAGTCGTAAATGAATGACTCGACTGGCTGATGATTTGGTAAGTAAAGATTTGATGTAATATTTATGTACTTTTTAACTAATTAACACACAAAACGGTTCTTTATCCTCCTTGAACACAAAACAGACAGAAAGAATTTGAACTTGCTTGTTGAGTGACGCAGTTGGGGAGTGATTTCACAGTTTGAGTAGTGTTGCAGATTTTCAAGGTCGTTTATGTCGATGTTTTCACATCCAAATCGTAGTAACCAAAGTTGAAGAAAATGGTATGTTGCTTTGGGAAATATTGGTGCATTGAATTAGTGGAATTCTTTTACACGATCAGGTATAGATTCTGAATTTTTACACCATTATGTTTGACAGGAACTGTCTACATTATGTTATTTTTATAATGTGCATTGAACTGTCTACAGATTGCAAAGGCATTAATGTACATGCATGAATGAGGTATAGCTCATATGGATGTGAAGTGGATAATATTTATGTAAAGAATGGTATTTATAAATTAGGTGATTTCGGTTGTGCAACCCTTCTGGATAAAAGTCTTTCGATAGAGGAAGGAGATGCACGGTACATGCCTCGAGAGCTGTTGAATGATACGTTTGAGCACTTGGATAAAGTCGATGTATTTTCACTGGGTACAACTGCTTATGAGCTTCTGAAAGGGTCTCCATTACCTGATTCTGGCCCTCAGCTTTCTTATCTTAGAGAAGGCAAGATCGCTTTGCTTCCTGGGATTTCTATGCAGTTTCAGTGCTTACTCAAGGTACAGGTTACAACCTAAACAGCAGGCAAATACGCATATTGCAGTATGATTTTAGTAATACTAATGGTCTTAGTATTAATTATCGATACATTAATTTTACAGTAACAAATACAATTACCAATTAACATAGCAATTTGCATTAAATAATAACACTGAATTGATATTATGTCTATGTAGGCAATGAGGGACCCTGATCCAGCTAAACGTCCTTCAGCCAAAGAAATCATTGAAAATCAATATTTGAGAAGGGATGCAAATTCTTCTGTTAGTGATGATGGTAATGGTTGCGTCTGCTTTGTACTTGCACAAAATTTTGTAAAGATATGCCTTGATAATAGGCAGATGTGGATGTCATTTTATATTGGACTTGTATCCATTCTGATAAATATGTAATATCATGTGATTGTGAACGTCATGACAATAGCATCAATTGTCATTTGCAAATGTAAGTTGCGGATATTTTGTTGTTTATGGTTCCGTTATGTTGGAATGAAACTATGGTTATATAATCAAACAATGGTTATATTTATAGCGGCAAAATGGTGTTGTAAAGATTTCTAATTCGGTTGAGATTTAGCTGTATTATAGCGGCTACAATGAGCTATTGAATAAATATTTTATAGCGGCAAAATGGTGTTATAAAATTTCCAGTTCCGTTGAGATTTAGTTGTGTTATAGCGGCTATAATGAGCTATTGAATTAAACGTACCATGGCGGCGAATTTGCGTTATAAAACTAAGCTCAACATAGCGGCATATTTTGTGTTATAAATATTCAATAGTTTTTTATAACATGTCGATATACAGCGCTTATCAAACCGCTATGGTTGTGATTAATAGCGGTTATATGCTACTATAAAAGACACTTTTTGTTGTAGTGCCTTTAAAACGGTATAAAAATAAACAGATAACTTAGAATAAGATAGTTAAAAAGGTTGGAAAAATAGCAATTAAATCCTTTAGAACAAAATATTTTTGAAGTCTAATTTCAAACTAAAATAGTTCCTATCTCAAAAAAAATTCCAATTCAAATGGCAATTTATAGTATTTTTAGAATACTGATTTAAGGCCAATAGCTACCCAATGTTTAACCAATATTGATTATTGATTTTTTATTACTATTGGATTTTAGTTTTAAACATAGCAATGTCATAACCAATAGCGTCCATAGATCTGATTTCAAATCAAATAATTTGTACAACATGAATTTTATTAAAATTAAAATCATGGTGAGGAATCATGTTGGATCCCTCCAACCTATCCCCCCGCATCACAAATAATACATAATTATATAATATGGGGCATCCGCTCTTATGCTGGTATATATAAAAGGGTCGTCCGCTCCAGGTGCAGGAATAAATCCAAATCAACTAATAAAAACAGTAAATCATCCAAATGTTCAATCATCAATTTTTTTTAAACTATACATCACACTAGTTAACCAAAAAGGTAAGTTTAACTTACCGAAATTTCAATCGTCGCCGAGGCGTTCCGATTTGGAACTAAGATCGGATGACATCCGATTTTACCCAAATTTCAACAATCTACAAATCCGATTAAACCAGTTCCATTGCGAAGCTTTTGTCTTTACGAGTGCAACGCAAAAATATGTGCCTCTAATGGACCTCGTACGAATAAGTTATCAAATTTATAAGTTAACGGGATTTAAACATAAATTAATTTCACTAATTACTTTAATTGTCAAATAATTACATTCTTTAACCTTACTTCTTCCATCATACACAACGTGCATAGAGATACCCAAAGACCTGGAACGCAGTGCCTTCCTCTATTGATTCCCCATCGTTCGTTGACGAAATCGACAACCGTTTTCTCCGACGAACTTCACTCCTCGACCTCTCCACCCCGGACCTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020254629.1	3.8e-47	wee1-like protein kinase
Swissprot	Q6Z829.1	8.3e-47	Wee1-like protein kinase
trEMBL	A0A835Q4P5	8.0e-47	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G02970.1	63.93	4e-42	169	ATWEE1;WEE1	WEE1 kinase homolog

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g471949	AT1G02970.1	122	44	0	229	350	376	497	63.93	4e-42	169
g471949	AT1G63700.1	131	71	1	48	177	199	329	45.04	6e-18	89.0
g471949	AT1G55000.3	69	36	1	1	66	105	173	43.48	3e-09	60.1

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	229	348	50.6	1.5e-13

Gene Ontology

Accession	Ontology	Name
GO:0000075	P	cell cycle checkpoint
GO:0000076	P	DNA replication checkpoint
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0051726	P	regulation of cell cycle
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007049	P	cell cycle
GO:0007050	P	cell cycle arrest
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0022402	P	cell cycle process
GO:0031570	P	DNA integrity checkpoint
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0045786	P	negative regulation of cell cycle
GO:0048519	P	negative regulation of biological process
GO:0048523	P	negative regulation of cellular process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K06632	WEE1; wee1-like protein kinase	EC:2.7.11.1	Cell cycle	ko04110

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network