result

Gene information

Detail information of g476480

Location

Gene	Chr	Start	End	Strand
g476480	Scaffold_85157:HRSCAF_468243	168538	169515	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008808344.1	2.8e-112	mitogen-activated protein kinase kinase 5-like
Swissprot	Q8RXG3.2	3.8e-98	Mitogen-activated protein kinase kinase 5
trEMBL	A0A8B7CXM9	2.0e-112	mitogen-activated protein kinase kinase 5-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G51660.1	59.45	2e-102	368	ATMEK4;ATMKK4;MKK4	mitogen-activated protein kinase kinase 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g476480	AT1G51660.1	328	120	3	1	318	10	334	59.45	2e-102	368
g476480	AT3G21220.1	275	97	2	47	321	58	328	63.27	1e-99	359
g476480	AT1G73500.1	315	150	5	10	320	6	308	47.30	3e-73	272

Ortholog group

Species	Genes
Allium cepa	g476480.t1
Allium fistulosum	AfisC6G01760; AfisC6G01762
Allium sativum	Asa8G04786.1; Asa8G04792.1
Arabidopsis thaliana	AT3G21220.1
Oryza sativa	LOC_Os02g54600.1; LOC_Os06g09180.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	63	318	200.1	3.7e-59

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0001932	P	regulation of protein phosphorylation
GO:0001934	P	positive regulation of protein phosphorylation
GO:0002376	P	immune system process
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0051726	P	regulation of cell cycle
GO:0006952	P	defense response
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006521	P	regulation of cellular amino acid metabolic process
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006955	P	immune response
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0007346	P	regulation of mitotic cell cycle
GO:0008219	P	cell death
GO:0012501	P	programmed cell death
GO:0008150	P	biological_process
GO:0009507	C	chloroplast
GO:0009532	C	plastid stroma
GO:0009536	C	plastid
GO:0009570	C	chloroplast stroma
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009626	P	plant-type hypersensitive response
GO:0009791	P	post-embryonic development
GO:0009814	P	defense response, incompatible interaction
GO:0009838	P	abscission
GO:0009889	P	regulation of biosynthetic process
GO:0009891	P	positive regulation of biosynthetic process
GO:0009893	P	positive regulation of metabolic process
GO:0009908	P	flower development
GO:0009987	P	cellular process
GO:0010227	P	floral organ abscission
GO:0010229	P	inflorescence development
GO:0010364	P	regulation of ethylene biosynthetic process
GO:0010365	P	positive regulation of ethylene biosynthetic process
GO:0010562	P	positive regulation of phosphorus metabolic process
GO:0010565	P	regulation of cellular ketone metabolic process
GO:0010604	P	positive regulation of macromolecule metabolic process
GO:0010817	P	regulation of hormone levels
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0046886	P	positive regulation of hormone biosynthetic process
GO:0019220	P	regulation of phosphate metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019538	P	protein metabolic process
GO:0022414	P	reproductive process
GO:0023014	P	signal transduction by protein phosphorylation
GO:0033554	P	cellular response to stress
GO:0023052	P	signaling
GO:0031098	P	stress-activated protein kinase signaling cascade
GO:0031323	P	regulation of cellular metabolic process
GO:0031325	P	positive regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031328	P	positive regulation of cellular biosynthetic process
GO:0031335	P	regulation of sulfur amino acid metabolic process
GO:0031337	P	positive regulation of sulfur amino acid metabolic process
GO:0031399	P	regulation of protein modification process
GO:0031401	P	positive regulation of protein modification process
GO:0032147	P	activation of protein kinase activity
GO:0032268	P	regulation of cellular protein metabolic process
GO:0032270	P	positive regulation of cellular protein metabolic process
GO:0032350	P	regulation of hormone metabolic process
GO:0032352	P	positive regulation of hormone metabolic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0033238	P	regulation of cellular amine metabolic process
GO:0033240	P	positive regulation of cellular amine metabolic process
GO:0033674	P	positive regulation of kinase activity
GO:0034050	P	host programmed cell death induced by symbiont
GO:0036211	P	protein modification process
GO:0042325	P	regulation of phosphorylation
GO:0042327	P	positive regulation of phosphorylation
GO:0042762	P	regulation of sulfur metabolic process
GO:0043085	P	positive regulation of catalytic activity
GO:0043170	P	macromolecule metabolic process
GO:0043207	P	response to external biotic stimulus
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0043549	P	regulation of kinase activity
GO:0044093	P	positive regulation of molecular function
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044422	C	organelle part
GO:0044424	C	intracellular part
GO:0044434	C	chloroplast part
GO:0044435	C	plastid part
GO:0044444	C	cytoplasmic part
GO:0044446	C	intracellular organelle part
GO:0044464	C	cell part
GO:0045087	P	innate immune response
GO:0045764	P	positive regulation of cellular amino acid metabolic process
GO:0045859	P	regulation of protein kinase activity
GO:0045860	P	positive regulation of protein kinase activity
GO:0045937	P	positive regulation of phosphate metabolic process
GO:0046885	P	regulation of hormone biosynthetic process
GO:0048367	P	shoot system development
GO:0048437	P	floral organ development
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050790	P	regulation of catalytic activity
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051173	P	positive regulation of nitrogen compound metabolic process
GO:0051174	P	regulation of phosphorus metabolic process
GO:0051176	P	positive regulation of sulfur metabolic process
GO:0051246	P	regulation of protein metabolic process
GO:0051247	P	positive regulation of protein metabolic process
GO:0051338	P	regulation of transferase activity
GO:0051347	P	positive regulation of transferase activity
GO:0051704	P	multi-organism process
GO:0051716	P	cellular response to stimulus
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0065009	P	regulation of molecular function
GO:0071704	P	organic substance metabolic process
GO:0080090	P	regulation of primary metabolic process
GO:0090567	P	reproductive shoot system development
GO:0098542	P	defense response to other organism
GO:0099402	P	plant organ development
GO:1900908	P	regulation of olefin metabolic process
GO:1900910	P	positive regulation of olefin metabolic process
GO:1900911	P	regulation of olefin biosynthetic process
GO:1900913	P	positive regulation of olefin biosynthetic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0062012
GO:0062013
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K13413	MKK4_5; mitogen-activated protein kinase kinase 4/5	EC:2.7.12.2	MAPK signaling pathway - plant	ko04016
			Plant hormone signal transduction	ko04075
			Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network