result

Gene information

Detail information of g481242

Location

Gene	Chr	Start	End	Strand
g481242	Scaffold_85670:HRSCAF_468756	297697	299988	-

Sequences

CDS

>g481242.t1
ATGTTGCCTACCGAAAAGGTTTCTAAAACAAACAAGACAATAATGACAATCGATGATAGAGAGACTAGTGACGTGGTAGTCAGACTAAGAACAAACGAAGGTAGAGATCAATGGTGTTATTGCCACGCTAAAATTCTAACTACAAAAAGCAAATACTTCGCTGACCGACTCTCTGATGAATGGCCCACATGCCAAATTCTTGATTCCCGTTACTGCGTAGAGGTGTACTGCAACGAACTCGAGTTCAATTTCTATGTCACCGCTCTTCGCCTTTTTTACATAAAAGAACCTCAAATATGTCACAATGTACGAAATGCACTAGGAATTCTTCAAGTTGCCATTAATTTGGGTTGCCCACAAATGGCCAATGCTTGCATGGAGTACATAGAAGCCATGCCATGGGAAGAAGCTGATGAAGAAGAAATACTGAAAATTATTCCTAGTCTCGGGCCTTACTATGAAAGAATTTTAGCTCGCCTTCAACCTGTGGATAAACCAATAATTTCTGATATTTTCATATCTTCCATTCAGTTTGCTACGTCATGGCCTCCATTATCAATGCAGGAGATGAAATCATCTGCCCAAGAACAAATCGAATATATGTTGACTGAAGATGATGATGCACCACTTGTATCTTTAGATGATACAGCAGTAAAAAATGAATTGAGAAATTGTGTGCATTCTTTACTGACAAGATTTGGTTGTATCGTAGAAAATCAAAGCGGGCTTCAAGAGTTGGTTTACATTCTTTGTGACATATCTTGGGTTTGTCAAATACTGAACAAGATGGAGATGATGAAGGATTTAGTTCTATATTGGGTTGACATGTCAGTTAAAGTAGTAAATATGGATACAGATTTATCTATCAAGACTAAATTTAAGATAGTAGAAGTTGCTTCTAAGGTGTTAGAAGCAATCGGATATGGAAATGTAATATTGCCATCGGCGAAAAGGTTCCATGCTGTGAAAATCTGGTTACCATATGTGCAGAAAACAAAATCTTTTGTTGAGCAGGATAAAGTGGAGGATGAAGAGGTTGAGGCGATCAGAACTAATAATGAAATTTGGCAAGGACTGGAATCAGCTTTTGTTTCAATTATATTAAGTCTGCCATTGGTAAATCAAGCAGATATTTTATCTGAATGGTTGACAAGTAAGCATGTAAGATATCCGGACCTGAGCGAAGCATTTGAGGTGTGGTGTTACAGGTCTAAAATTGCAAGAAGGAGAGCTGCTACCATAGAAGGCATAAGCAAGGCAGAAAATGTGTAA

Protein

Gene

>g481242.t1
ATGTTGCCTACCGAAAAGGTACGAAGCGATCCCTACTTATTTTTTGTATAAAAAATAGTAAGTTCTCTAATTTATACTTTAATCGACTTTCTTAATTAACATCTACAACTTTCCCTAATATCGTATAATTATATTTGGTTTATTTGGGTTCTCAATCTAATCCATACTTGTTAACTTCTGAGTCTTCTGACGGCCTATCCGATTATCATTACGAAGCTACTATAAATTTTAGCTTAATTTACTTGTTTGCACTTTGCTCAAATTTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCATTGGCACAGATTCTGTGCATTATTGTGTGCCTTGCTCCATTTTTTATGTTTCAAAATGTTCATGAAGTGTAGTAACTCGATGCTACACGATGTTAAAGCAAACTGTTGGACTATTTGCACCTGGTTTCAGCTACAGGCCACGTATCATTTTTTTTTAACTACGGTCGGTGGACAAACGCCGAACCAGGCAAGGTTCGATCGGCGGCCACCGACCGTGGTGGCCGCTGGCACAAACTGGGATGCTGATAGCGTCACACTGAACTAAATCTGGTGGTTAGCCCAGTGACCATTACAATTGTTGTATACTGACTTTATAACTTCAACCAAGGCATCCTTATCCAAAAAAAACTCACCCGCCATCTAGTGTTGGATGTTCTAAGGTAGATCGCTTCTAGTATTTTTACCTCTTCTGATTTGAATTTCATTACATGAATCTGCATAAATCATGAACAAGCGACTTTTCAGTGTATAGACTGGTTATGTGTAGACGTAGAACCTTTTAAAACCGAGTTTTCAAGCTGTTATGTATTTCGTAAATGGCCTTTCCTGACCTTATTAATCAGTGTTATGTCATCCTGTTGCTTATTTATTTTATACCGTCAAACAGCAAAATCAATCATATAGTATTAACATTCAATAAGCATTGTTTAATTACAGATAAGTGGTATGTAACTGATGTACATCTTTGTTGCTATTTTTTTCAGGTTTCTAAAACAAACAAGACAATAATGACAATCGATGATAGAGAGACTAGTGACGTGGTAGTCAGACTAAGAACAAACGAAGGTAGAGATCAATGGTGTTATTGCCACGCTAAAATTCTAACTACAAAAAGCAAATACTTCGCTGACCGACTCTCTGATGAATGGCCCACATGCCAAATTCTTGATTCCCGTTACTGCGTAGAGGTGTACTGCAACGAACTCGAGTTCAATTTCTATGTCACCGCTCTTCGCCTTTTTTACATAAAAGAACCTCAAATATGTCACAATGTACGAAATGCACTAGGAATTCTTCAAGTTGCCATTAATTTGGGTTGCCCACAAATGGCCAATGCTTGCATGGAGTACATAGAAGCCATGCCATGGGAAGAAGCTGATGAAGAAGAAATACTGAAAATTATTCCTAGTCTCGGGCCTTACTATGAAAGAATTTTAGCTCGCCTTCAACCTGTGGATAAACCAATAATTTCTGATATTTTCATATCTTCCATTCAGTTTGCTACGTCATGGCCTCCATTATCAATGCAGGAGATGAAATCATCTGCCCAAGAACAAATCGAATATATGTTGACTGAAGATGATGATGCACCACTTGTATCTTTAGATGATACAGCAGTAAAAAATGAATTGAGAAATTGTGTGCATTCTTTACTGACAAGATTTGGTTGTATCGTAGAAAATCAAAGCGGGCTTCAAGAGTTGGTTTACATTCTTTGTGACATATCTTGGGTTTGTCAAATACTGAACAAGATGGAGATGATGAAGGATTTAGTTCTATATTGGGTTGACATGTCAGTTAAAGTAGTAAATATGGATACAGATTTATCTATCAAGACTAAATTTAAGATAGTAGAAGTTGCTTCTAAGGTGTTAGAAGCAATCGGATATGGAAATGTAATATTGCCATCGGCGAAAAGGTTCCATGCTGTGAAAATCTGGTTACCATATGTGCAGAAAACAAAATCTTTTGTTGAGCAGGATAAAGTGGAGGATGAAGAGGTTGAGGCGATCAGAACTAATAATGAAATTTGGCAAGGACTGGAATCAGCTTTTGTTTCAATTATATTAAGTCTGCCATTGGTAAATCAAGCAGATATTTTATCTGAATGGTTGACAAGTAAGCATGTAAGATATCCGGACCTGAGCGAAGCATTTGAGGTGTGGTGTTACAGGTCTAAAATTGCAAGAAGGAGAGCTGCTACCATAGAAGGCATAAGCAAGGCAGAAAATGTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020275501.1	2.1e-155	BTB/POZ domain-containing protein At3g05675
Swissprot	Q8RX01.1	8.2e-117	BTB/POZ domain-containing protein At3g05675
trEMBL	A0A5P1EGZ0	1.5e-155	BTB domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G05675.1	54.23	7e-126	447		BTB/POZ domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g481242	AT3G05675.1	426	166	8	16	416	13	434	54.23	7e-126	447
g481242	AT3G05675.2	426	166	8	16	416	13	434	54.23	7e-126	447
g481242	AT4G10800.1	260	138	7	170	410	14	268	37.69	4e-44	176

Ortholog group

Species	Genes
Allium cepa	g481242.t1
Allium fistulosum	AfisC1G02524
Allium sativum	Asa7G02439.1
Arabidopsis thaliana	AT3G05675.1; AT3G05675.2
Oryza sativa	LOC_Os07g47260.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00651.28	BTB	Domain	21	130	20.7	0.00034

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network