result

Gene information

Detail information of g483665


Location
GeneChrStartEndStrand
g483665Scaffold_86029:HRSCAF_4691155913776894+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010933626.21.6e-33LOW QUALITY PROTEIN: homeobox-leucine zipper protein HAT4
SwissprotQ05466.14.1e-29Homeodomain-leucine zipper protein HAT4
trEMBLA0A8K0ILP39.1e-34Homeobox domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G47370.157.552e-31 134HAT2Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04618.9HD-ZIP_NDomain17721446.92.9e-12
PF00046.26HomeoboxDomain24829957.76.6e-16

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000902Pcell morphogenesis
GO:0016049Pcell growth
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0007165Psignal transduction
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0040007Pgrowth
GO:0007154Pcell communication
GO:0046983Fprotein dimerization activity
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0008283Pcell proliferation
GO:0042802Fidentical protein binding
GO:0009314Presponse to radiation
GO:0009416Presponse to light stimulus
GO:0009628Presponse to abiotic stimulus
GO:0009639Presponse to red or far red light
GO:0009641Pshade avoidance
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009733Presponse to auxin
GO:0009734Pauxin-activated signaling pathway
GO:0009735Presponse to cytokinin
GO:0009755Phormone-mediated signaling pathway
GO:0009791Ppost-embryonic development
GO:0009826Punidimensional cell growth
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009908Pflower development
GO:0009987Pcellular process
GO:0010016Pshoot system morphogenesis
GO:0010017Pred or far-red light signaling pathway
GO:0010022Pmeristem determinacy
GO:0010033Presponse to organic substance
GO:0010073Pmeristem maintenance
GO:0010154Pfruit development
GO:0010218Presponse to far red light
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010582Pfloral meristem determinacy
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010629Pnegative regulation of gene expression
GO:0016043Pcellular component organization
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0022622Proot system development
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0032989Pcellular component morphogenesis
GO:0042221Presponse to chemical
GO:0042803Fprotein homodimerization activity
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0043621Fprotein self-association
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045934Pnegative regulation of nucleobase-containing compound metabolic process
GO:0048364Proot development
GO:0048367Pshoot system development
GO:0048438Pfloral whorl development
GO:0048467Pgynoecium development
GO:0048507Pmeristem development
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0048589Pdevelopmental growth
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0048869Pcellular developmental process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051253Pnegative regulation of RNA metabolic process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0060560Pdevelopmental growth involved in morphogenesis
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0071214Pcellular response to abiotic stimulus
GO:0071310Pcellular response to organic substance
GO:0071365Pcellular response to auxin stimulus
GO:0071478Pcellular response to radiation
GO:0071482Pcellular response to light stimulus
GO:0071489Pcellular response to red or far red light
GO:0071495Pcellular response to endogenous stimulus
GO:0071840Pcellular component organization or biogenesis
GO:0080090Pregulation of primary metabolic process
GO:0080127Pfruit septum development
GO:0090567Preproductive shoot system development
GO:0097159Forganic cyclic compound binding
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1902679Pnegative regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903507Pnegative regulation of nucleic acid-templated transcription
GO:1905328Pplant septum development
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0104004
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09338HD-ZIP; homeobox-leucine zipper proteinEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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