Detail information of g484579
| Gene | Chr | Start | End | Strand |
|---|
| g484579 | Scaffold_86151:HRSCAF_469237 | 1200517 | 1202235 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020242778.1 | 5.4e-39 | HMG1/2-like protein |
| Swissprot | P40619.1 | 3.2e-28 | HMG1/2-like protein |
| trEMBL | D6MK10 | 3.8e-34 | Transcription factor (Fragment) |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT1G20696.3 | 61.11 | 2e-35 | 144 | HMGB3;NFD03;NFD3 | high mobility group B3 |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| g484579 | AT1G20696.3 | 144 | 43 | 4 | 1 | 139 | 1 | 136 | 61.11 | 2e-35 | 144 |
| g484579 | AT1G20693.2 | 144 | 52 | 2 | 2 | 142 | 4 | 142 | 58.33 | 1e-34 | 141 |
| g484579 | AT1G20696.1 | 133 | 37 | 4 | 1 | 128 | 1 | 125 | 62.41 | 7e-33 | 135 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF00505.16 | HMG_box | Domain | 36 | 105 | 78.3 | 3.9e-22 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K10802 | HMGB1; high mobility group protein B1 | EC:- | Base excision repair | ko03410 |
| Autophagy - animal | ko04140 |
| Necroptosis | ko04217 |
| K11296 | HMGB3; high mobility group protein B3 | EC:- | - | - |