result

Gene information

Detail information of g486074

Location

Gene	Chr	Start	End	Strand
g486074	Scaffold_86358:HRSCAF_469444	104320	112122	-

Sequences

CDS

Protein

Gene

>g486074.t1
ATGTCTATGTGGACTCACTTCCCTAGACTCGCCTCGTATGCTATAGGGTCGCATATTGTCAAATGTCACGTCAATAGCATATCTGACTCACGCCGTGGAATAGCCTCATGCCCTACAGAGTTGCCTGTTGTCCTTACATTAACTAACTTGATTCACGCCTTGGACTAGCTTCATGCCCTACATGATCGCTTAACATCCACCTCTACATTGCTCCGTTGTAGCAACCCATTATTTCAAAACCCCGCAACTACACAACGAAGTCTCGAAACAGCGTCGCTAAAAGATAATACATATTGATATATATAGAGAGAGAGCTTAAGACAAAAACCATACTAAATGATAACTTTCAGAGTCTCACGACGAATGGCCACACAAAATATCATATTACACTAACACATATGTTTAATTACATATCTGATACCACAATGCAAGTCTGTACAAGCCAAAATCAATTAACTTCAGATACTGTCACGTCATATCTTTGATACACACTTTATTTACAATATATACTATAAATTCAAACCATGTCTTCTGATCCATCTCATCTCCAAACTCCATCACCTTGGATAATATAGATAAAATAAAAGATAGAAGTGGGTTATGCATATGTCAGCATGAGTGAATCAAATCTAACACAAGTATATTATCACGATAGTGGTATAACATGATTTAAGCCTAAGCATATTCTTCTGAACCTGCTTGTGCCACGCTATACTATCCACAAATGATCTGATCCTGAATGCCTACAGCAAACGATCCCCTATACGAAATTCGGTCTCGCCGCTTGTGGTAAAGGATTTCACATCTGCATAATCCGGTCTCACCGCCTACTGTAAAGGATTACACATATTGTCCTGACTCACGCCTGCCTCACCATGCGTGCTATAGGTCGGCTTTTGCCCACATCAAAACTCTCCTGAACCAACCTCGATGCTCTACAGGAGAATGCCATGTCAATACCTTGAAAAAAGGACCTGTCACGTGCACTGCAAGATTCATGTATTCACTCATTGGGCAAAGCTATATATATCATCATCATCAAACTATACGATCCAAGTCCATATACACCTAATCAACAACTATGCGACCTAAAGCCATACACTATACATTTTTATTTTCCCATTCCTATCAAGGTTTCATATACCCACCTAGTTGTCCAAAACTGTGTACACTCCATTAGTACCTCACCATCATCATGCCACACACTCATACACGCTTCAAGTATTCAACAATCGTATAAAGGTATGAGTGTTTTTCTTGAATAAAATACCGCTTTTTCTATCAAAAAAACTATTTTTCCAAGATCGCACACATACTACAACCATTCATCATCACCACCATCGATCTAGACACCCAACCAACATCCAACCTAATCGAAGAAATGTACAAATAATCCTCAGAGATCACCATGAGAAAAATCAAGTTATCACATGTCGAGGATAGGTGTTTAAAAGCCTGAATCCCAAACTTGAGACATTCAAAGGTGGACCGGTGTGCACCTATCGGTGCACTGGTGCATGTCTCAAAAACGTGATTTCTTTTCTATTTTTATGTATTCTAGTTTTCAGATTTCATTTCTTCTTATTTTTTATTATTCCTAAGGGTTATACTTCCTATATAAACACTATTTAGCAAGTTCCTAAGGTATTAACCATCTGCATACATAGATTTTGGTTAATGTCACATTTCAATATGAAATTTAGTTTCAAAATTACTTATTTTGGTTTTTTTGAATATAAAACTACATTATTTTCCCATACTTCAATTTTTAACCCTATTGTTAAACTTTTAAATGTCAAATTCACATCCTAAATTAGCCCCAAACCATCTTATATCAATACCAAAGCATTATATAAAGATCGAAGAAGCCACACTCACCAAATCAAGCTAAAAGAACTCATTTCGCCCACTGCCTCGAATTTCCAGGAAAAAAAATCTTTGAATTAACCTTCGAGTCTTACTCTACATGATAGAGAACTTTACTATGAATCCAATGCAACACGTCTCGTCTAATTTCGTTAAGAAATGGGAATTTTGTGCTGAGAGGAAGGGAGGAGGAAGATGAAGTAAACTGTTTTTCCGAAATTAGAAAAGAGAAGTTAGAAATGAAGATACATATTTTTAAACGAGTTTTAGGAGAGAAAAATTAAAACGGTATCTTGTTTGAATTCATAATTTCAAACTTGGCCCAACTCAGCCCAGTCTGGCCCGTTGTTCGCGCACAAATCCAGCCCACTTAAATAAAACCTCATCTCTCATTTATACGACATCTGATTCAGACAAATGAATACTCCATCTTGGGTAGAAAAATGAGAGCTACGCAATGATTTGACTACCTTCAGGTAATTCAACCATTTTTAAAAATTGTTATTTTTCCCATATAAGAAAATTTCCCAAAATACTCTCCAAATAAATTTAGATTTTTTATTTATTTATTATCATTATTTAAGTTATATACAAAATTTCGTGGTATTACATTCTCCTCCTTTAAAAGAATTTCGTCCTCGAAATTCCATAGGAGTGGAAAATGTAATAGAAACCCACTCTTTCATTTGCACACCCGTATTCGCGTACACACACAATCATTTAAACAAAGCAACATATCTATAGCTATTTTAATATATATATATATATATATAAAGCAAATACTTCCCCTACCGAAGCCTTTTTCGGACCGACGAAATTGACCTTTTTCAAATCATTTCATAATTTTTGGCAGTAAGGACATATTTGGTTTTTCCACTGCCCACTATGCTTTCGCATACTCGTTTCTAATCACGCCCCCATTTCAACCCTACCATAATCCTCCAAACTGCAACCACTCTCTCTTCAACCTAACTCGATTTCTTCTACTTCAACCGAGTGAGGAGGTAGAACATTGCGGCGGCGACTTTAGGAAATTTTTTTATGCCATTACGGATCTGGCAAGTAATATCATTATGTGTGATATATGCTTCAGTCTGATTCATGATTAGGTAAGAATCCTGCAATCATTTTTTCAATTTTAGATTTGGTAATTACTTGCTTTGGCAGCTTATATAGATTCGAAGCAATATTTGTTGGGTGAGTTTTGATACAGAAAGGCATAACAATGCTCCAATCTTTAGTGCCTAATTGTCCACATTATTTTGAGGGATCTGAAAATCAATGGAATACAAATAGTTATTGTTTCTTCATGTATTTTCGACCAAGGTTTCATTATTTTTTCATTTGCATTAAATTTGTAATTCAAAACTTTCTGGAAAATTTATCTTCGTTGTGTTTCATTAGCGAAATCATGATTTCAATGCTTGGTATATTTGTTGAACTTTTTACTGATGCTAATTGAAATATTATTCATTTATTCTTTAGAGATAGGGGGAATTGGTTGTTGAAATGCCTTTGAAAATACTGTGACCCTAAAAATACTAGATGGAGTTATCATAATAGAGGATCTTAGCCAGGTTAGCATACTTCTATATATTTGTTTTCATGTTTTGCAGTCTCTATTTATACTTCATAAAGTATTTATGTTACAAATCAAACTTTAATTGGCATTCAGATATAAACAAAGCACTTTATATCAAACTGTTAGCTATTTGTGATATCGTCCTCTGTACTACCACAAGAACTACATACAAGTTGGAACCTTACCAATGTTATCATACTGGAGGATAACCAGGTTAGCATACTTCCATATATTTGTTTTCATGTTGTGCAGTCTCCGTTTATACTTCATATACTGTTTATGTTACAAATCAAACTTTAATTTGCATTTACATATAAACAAAGCACTTTATATCAAACTGTTAGCCAAATTGTACATGTGATATGACCAGAAGGTTATAATTTTACCCTTAACCTTTGTATTTTGGGACATTGCATTTGTAAATTATGGTGAAATATTGGTTAATCCACCAAGATGCGTTTGCATTTCTTAATGATTTGACTTACTTGAAATTGTTATTTTCTAATTAAATAGAGTTACCCTTTATATTTCAAGAAAAGAAATCTATGCATAAAAAATATACATATGGGATGCTATCCATTCCAATCTTTAGTACCTGGACTGTTATAGTGTCTGGAGTACCTGTTCTTGCTTTTATTTGTTTCTTCTCTGTTATGTGCGTGTTAATGCATTTAGTACTTGAGCCCTTATCAAGGCATGCATGCATTGAGTACCCGAGAGCTTATTTCCCCCTGTTCTTGCTATTATTTTCTGGACCTGCTATATAATATTGCATGTATCAAGGCTTGCGTGTTCCATTCCTATTTTGTTTAGACCTGGTTTCTATTGCATGTTTACTTGCCTAACTAGAAATCTAATTTTGGATAAAAGAATATGTAGTATGTTGTAATTGAAATTAAAGAAAGTAATGAGCTTTCCATAGTTGTTTTGAACTGTAAATTATTAAGAATTTATGAAAGGTTATGACATTAGTAATTTATGGAAAAATATAATAATAATCAATTATCTTCTTATATATAAAGCAAATACCCAAGCAAGTGAAACCTTTTTCTAGCTGTCAAAATAGCCCTTTTACTTTATTAACTTCTTCATGCATTCAAAGGATTGATGTGTCTTTTAACTGAGGAAAACCCACAGTTTCCGCCTAATGCAAAATAGTCGGCACGTTTTTTCTATCTTCATCCTTCCTCGCTTCCCACGAACTCTTACTCATTTATTCACAAATCCAAGACCCTTTCTTCCTCATTGAAATTGCATCGATGACTTTACAAAACCCTAATTAATAAAGGAAAACACTTGAAAAACTCCAGATCTGTTATATCTTACTATGACATGAAAGCTTGCGGGTTTTGAAATTGAAAATAGGCTCTTTCCAATTTGGTATGTCTTCATCTTTCAGGTACGTGATTGAGTTGCTTCAATTTATCATTTTGTTAGCTCTTTGAAGCTTTATTATAATTTATGTTAAAGAAATAGTCGTTACTATTTGGTTTTTAATAGTCTATAATATATTATTGTTCATTTTTGACTACAAATACAATTTATAACTACTCATAGGTTAGTGAAATTGACAAACGTGAATCTATGAGTATTGACTATATTTCGTCAAACACCCAGATATTTGTTACAGATATACAAACATAACTATGTCAGTCTAATTTATTGAAGTAGTGAGAAATACAAGTTTTCAAGAATGGATTATTTCATGGATCATACTTGGATGTTTAGACGAAAAAATAATAGAGATGGAGCCCTGAAGATTAATCTTAAAAACTCATTTCCTCCAGCTATATTTTTCACATTTCCCAAATAAAATTCTGAAAGTTTAAACAAAATGAATATGGGTTGAGATGAGTGGGTAAAACCGAATCTGATCCCAAAACTTCATTTTTAGTTATTTTTAAACTAATTGCTTTTCCTGTTAAGATTTGTTATTTATTCGTCAACAACCAATATTTAGCTAACTGGAAATTCAAAACCCGTTTGATTTGGGTGTAACATTTTGCCTTTATTAGGTAGAGTATGCTTAATGACAGATTTGACCCAACTACTCATGTTTCCTCCCTCTTCTTCTTATCTATATTTAAACTTAATATGATTAAAATTACTTTTCAGATTTACCGCATGAATGAGGATGGACGGCGCTTGAGGTTGGCTTTTTCTCTAAACTATTTAAGACATATTTTACTATTATTTGCATTTTTGGGACCATTTAATCTTAGTGTACCCAAGCTTGGATATCTTATAAACAGTGGTTGTTCATGTTTATGGTGGATTAATTAAAAAATTATGGATTTCTTGAATTTAATTTTGAGTGATATGTGGGCTAACAATAAACAAGAGTTATTATCAGGAATATGTTTCGTGTAGATAGTTGTTCAATTCATTTTTATGTATGTAACACTACATTTTAGTATAATATAAACAATTGTTTCAACCTAGAAGCACATGGATTGTTATTTTATCATGATTACTATAATGTTCCTTTTATTCTAGGATTCAACGTAATAGAGATTGTTGCCTATACATTCATTTTGTCTGATTAAATAAGAAGTGATGAGAACTACATCTATCTGTGCTCTTCTGAAGTTGTATTCAATTGATTATTTTTCACTTTATTCTTTTTTATTCCACGTCTTCTTAGCTTCTATTCAATTTTTATGTTATTAAAACCATAAATTTTTGACTTGAGAAAAAAATGTTCAACTATTCTTTATGTTATGCTTAAGAGGAAATTCTAAAAAAGCTAAGGGAAATTTCGATTCCTAGCTCCATCTCTGACAGCATACAATTTTTGGAGTATAAATGTCATTTTCATTTTCAGATTTTGGCTAGTAGTGTAGAGATGTTGTGATTACAGTTATACCATAAAATTGATGTAGTCGCATATGTACCATTAAATTCTAACGCACAATAAGCATGCATGGTTTGTTTTATTGGTAAAATTTAAAATTTACACATCTAAAAATACTGATTACATTGTTTTTATTTTGTCTTATAGGTTTTGCAGAACATCAAGTCTTTTGCAAAAGAATAGAGAAAGATATTCCAGTTGCTTTATGCTGTAAGTTAAATTCCAAACTTCATTGTTTCTTTTATTGTTCCATTAAGTTATTGGTTTTTCTGAGCTTACAAATGATAGATTAAAGTAAAAAATTGTCAATTTTACGACGTTGGCGAATAAAAAGAAAGTATTCATGTTCTAAGAATATAAATCTATAGAAATCCTTTTATATGCAATCTGATAACTTTATGAGAATAGCAATATCACATATGATATTTGCTTAGACATGCCATTGTATGGCAGAAGTGTTATTCAAATACCTTTGAGGCGATAAAGTAGTTCTTAGCTTTTTACCACATGCATAACAGTTTTATTACATACTTTGATATGCAGTTGTGTGATTGAATTTTGATGCAGGAAAATAGAAGCATATGCTGCTATTGAAATGAACGCTGGTTGTAGAACAGTTCGTGAACCGAGGATTGTGGTTCAAACTACAAGCGAACTTGACACTATAGACGATGGGTATAGGTGGCATAAGTATGGAGAAAAGGTTGTTAAAGAAAATCCAAATCCAAGGCAAGTACCAGTAGCTTAGTAAAAAAATCTTTATTTCTCGGTTAAAATCATACATTTGCAACATATATGTACTTGTTAATCAAACAGTTATGTTACTCTACAGAAATTACTACAAGTGCACAAGCGCAAGATGCACAGTGCGAAAGCACATAAAAAGAGCATTTCAGGACCTTAAATTAGTCATCACAACATACGAAGGCAAGCACAACCACGAAGTCCCTACAGCAAAGAATAGCCATCATGCCAGCTCAACGCAGTCTTCCACGAAAGTGATTTTGCCAGCTCACCACCCTAATGGTCCAATAGGCTTCAATCGCCCTGCGTTTGGGCTCAGTCCAGCATTCAATATTAGGGCAGGCCCACCAGGTATAACTAATTTCAAATTGGGCCATATGGGCCCACCATCGACCATTTTTATGCATGTAGAGGAGAATTGGCTATTTTATCCTTCTATGTTCACTCAAAACTGTTAGTTGTTTTACTATCTAAAAATATTGATTATGAGTACTGATTGTTTGGATATGAATTTGTGACTGTTTATATAATACCACTGTCAATCACATTTCATAACAACAATACACAAATATACAAACAATATGAGTTTGTGACTGTTTATATAATACCACTGTCAAACACATTTCATAAGTACAATACACAAATATACATATGTACGAACATATACATACACACATATAAATTGTACTTCAATATCGATTAATTCACAGCTAATAGCATGGAAACAAGGGGACAACAACCTGCTAATCGACCCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	KVI10291.1	1.0e-26	DNA-binding WRKY
Swissprot	Q8S8P5.2	2.1e-21	WRKY DNA-binding protein 33
trEMBL	A0A124SHQ4	7.4e-27	DNA-binding WRKY

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G56270.1	56.25	1e-24	110	ATWRKY2;WRKY2	WRKY DNA-binding protein 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g486074	AT5G56270.1	96	21	2	105	180	455	549	56.25	1e-24	110
g486074	AT4G26440.1	144	57	4	70	192	306	446	43.75	4e-23	104
g486074	AT2G38470.1	103	26	2	119	198	343	445	52.43	1e-22	103

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	138	162	26.4	6.1e-06

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0000578	P	embryonic axis specification
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006950	P	response to stress
GO:0030010	P	establishment of cell polarity
GO:0007163	P	establishment or maintenance of cell polarity
GO:0007275	P	multicellular organism development
GO:0009790	P	embryo development
GO:0009880	P	embryonic pattern specification
GO:0007389	P	pattern specification process
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0009266	P	response to temperature stimulus
GO:0009409	P	response to cold
GO:0009555	P	pollen development
GO:0009628	P	response to abiotic stimulus
GO:0009791	P	post-embryonic development
GO:0009793	P	embryo development ending in seed dormancy
GO:0009798	P	axis specification
GO:0009846	P	pollen germination
GO:0009856	P	pollination
GO:0009889	P	regulation of biosynthetic process
GO:0009942	P	longitudinal axis specification
GO:0009960	P	endosperm development
GO:0009987	P	cellular process
GO:0010154	P	fruit development
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0022414	P	reproductive process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0044706	P	multi-multicellular organism process
GO:0048229	P	gametophyte development
GO:0048316	P	seed development
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051704	P	multi-organism process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K18835	WRKY2; WRKY transcription factor 2	EC:-	Plant-pathogen interaction	ko04626

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network