result

Gene information

Detail information of g487812

Location

Gene	Chr	Start	End	Strand
g487812	Scaffold_86608:HRSCAF_469694	114641	116601	-

Sequences

CDS

Protein

Gene

>g487812.t1
ATGCTCACTGGCTTGGCTCTTCTTCTCTTTGCTCTCGGTCTTTACATCTACTTCAGAAGATACAGATCAAATGGGGACTCTAGAATTATTTCCAGGTACTCCTGGGACATGAAGTCATTCAGAGTTCTTGCATTCGACGAAAGAGAGATAGTAAATTCCATAACAAAAGAGAACGTCATAGGCAAAGGAGGTTCAGGAGAGGTTTACAGGGTTGGTTTAGGCAGTGGAAAAATAGTAGCAGTGAAGCAGATATGGCACAATCGTATGATTTCTGACCCACGTAACGACTCTACAGCGATGCTGAGTAGGAACTCTTATTCCTTGAAGTCAAGAGAGTTCGATGCAGAGGTGAACACGTTGAGTTCTATTAGGCATGTGAACGTGGTGAAGCTGTATTGTAGTATAACAAGTGAGGATTCAAGCTTGTTGGTGTACGAGTATTTGCCTAATGGGAGCTTGTGGGACAGGTTGCATACAGTGGCTGGGGAGAAGCTTGGTCTGGATTGGGAGACGAGGTATGAGATAGCTTTAGGTGCTGCTAGAGGTTTAGAGTATTTGCATCATGGATGCGAAAGGCCGATTCTGCATAGAGATGTGAAGTCGAGTAATATATTGCTGGATGAGTTCTTTAAGCCCAGGATTGCTGATTTCGGGCTTGCTAAGATATTGCAGTCTGGGGTTGGGAAAGACTCGCTGACTCACGTCATTGCTGGAACGCATGGCTATATTGCTCCAGGTAAGGATTTCTTCCCATATATGAAATTGTTTACTCCAGCTTAGAGAATTTGAATACTGAATTTATTAGTTCGTTTGCTGCATGATTATTGAATTTTAACCCAGACAGGATTACAGTATGGTATTAGTGTTTCAGGCGATGGACCTTTTTGGCTTTCATGATTTACCTGAAATCGCCTGAGCGGTGATTCACATATTGTTCTTAACCTTAATCTGCTGATTCAGTTTAAAAATTTACATCCAGTACATGTCTACTTTGATAACTCATTCGACCAGTAAATATGAGATAGTTTATTTCATAAGGCTTTCTGCCATATGAAAATCTAGAAAAGGCCATTAATGAAAATTAATTTTATTTCAAATAATAATAATTCAAATGTTCAGATTAGCAGAATAGCTTTTTAGTTGCAGTGTGTTGAATTTTTTTTCTTTCTTTCTTTCCATGTGTTGTTTGTAATGTATACCTACCTCACTAGACATGGGCCATATTAGATAATAGATAGAAGCTACTGTATGATTAGTATATATGCTTGGTTGACTATGGTATATATTTTGTGCACATGCTTAAATAACAGGAGGGACAAACTTTGCAACTTCCTAATATGAGTCAGTTGGCTTTATAATAAGCTGTTTACATAGAAGCTTCAGCATTGACCCAATCTTTATGCAACATATCATTTGTGACCTCACATTTCAGTTTAAAAATAAAGATCACAACCACAACTTCGCTTGAACTTCACGTACTTAAATTAAAATTGACTTATATATTGTCAAATTGCGTAATTAACGAGCTTAATCTAAATTGATGAACTACAGAGTACGCATACACATGGAAAGTAAACGAGAAGAGCGATGTATATAGCTTCGGAGTGGTTCTTCTAGAACTGGTAACAGGAAGAAGACCGATAGAAGCAGAGTATGGGGAGAACAAAGACATCGTCTACTGGGTTTCCGGAAGGATGACAAGCAAAGAAAGCGTGATGGGGCTGATAGACGCCACCTTAACCACAGACTCTGAAAAAGAAGGCGCTCTTCAGGTTCTAAAAATAGGGGCTCTGTGCACTGCAAGGCTACCAGCAATGAGGCCAACAATGAGAAATGTAGTTCAAATGCTCGAAGATGTTGCTAGCTATCACGTGATTGTGGACGTTGATTTGAAAGAAAGCCTAAACAATGTTATGAAGCTGGAGAAAGTTTCTAGCAATAAATTGAAGACCAGTCCGTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256303.1	1.4e-147	LOW QUALITY PROTEIN: receptor-like protein kinase HAIKU2
Swissprot	F4I2N7.1	2.0e-114	Receptor-like protein kinase 7
trEMBL	A0A5P1FCE1	1.0e-147	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G09970.1	60.45	1e-120	430	LRR XI-23;RLK7	Leucine-rich receptor-like protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g487812	AT1G09970.1	359	135	4	4	362	617	968	60.45	1e-120	430
g487812	AT1G09970.2	360	135	5	4	362	617	969	60.28	2e-119	425
g487812	AT3G19700.1	350	151	5	7	352	624	971	55.14	3e-105	378

Ortholog group

Species	Genes
Allium cepa	g487811.t1; g487812.t1
Allium fistulosum	AfisC1G06669
Allium sativum	Asa7G02866.1
Arabidopsis thaliana	AT1G09970.1; AT1G09970.2
Oryza sativa	LOC_Os12g43640.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	55	343	148.5	2.1e-43

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0001653	F	peptide receptor activity
GO:0002376	P	immune system process
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0007165	P	signal transduction
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006955	P	immune response
GO:0006979	P	response to oxidative stress
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0009791	P	post-embryonic development
GO:0009845	P	seed germination
GO:0009960	P	endosperm development
GO:0009987	P	cellular process
GO:0010154	P	fruit development
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0022414	P	reproductive process
GO:0023052	P	signaling
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0036211	P	protein modification process
GO:0038023	F	signaling receptor activity
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0045087	P	innate immune response
GO:0046777	P	protein autophosphorylation
GO:0048316	P	seed development
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:0090351	P	seedling development
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network