result

Gene information

Detail information of g494504


Location
GeneChrStartEndStrand
g494504Scaffold_87478:HRSCAF_470564234379250880-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK56476.10.0e+00uncharacterized protein A4U43_C10F9110
SwissprotQ6K431.10.0e+00SET family protein 33
trEMBLA0A5P1E6470.0e+00Histone-lysine N-methyltransferase ATX2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G05830.157.380.01042ATX2;SDG30trithorax-like protein 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag494504.t1
Allium fistulosumAfisC6G02415
Allium sativumAsa6G04737.1; Asa8G04324.1
Arabidopsis thalianaAT1G05830.1; AT1G05830.2; AT2G31650.1
Oryza sativaLOC_Os09g04890.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00855.14PWWPDomain20929653.32.6e-14
PF05964.11FYRNFamily35440455.05.1e-15
PF05965.11FYRCFamily41349150.71.3e-13
PF13831.3PHD_2Family52555938.84.2e-10
PF13832.3zf-HC5HC2H_2Domain568690105.12e-30
PF00856.25SETFamily81992559.74.1e-16

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005886Cplasma membrane
GO:0051276Pchromosome organization
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000785Cchromatin
GO:0001067Fregulatory region nucleic acid binding
GO:0008152Pmetabolic process
GO:0003002Pregionalization
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0016020Cmembrane
GO:0003824Fcatalytic activity
GO:0005488Fbinding
GO:0005543Fphospholipid binding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0005694Cchromosome
GO:0043231Cintracellular membrane-bounded organelle
GO:0016570Phistone modification
GO:0006325Pchromatin organization
GO:0006355Pregulation of transcription, DNA-templated
GO:0006464Pcellular protein modification process
GO:0006479Pprotein methylation
GO:0008289Flipid binding
GO:0006807Pnitrogen compound metabolic process
GO:0006996Porganelle organization
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0007389Ppattern specification process
GO:0008150Pbiological_process
GO:0008168Fmethyltransferase activity
GO:0008170FN-methyltransferase activity
GO:0008213Pprotein alkylation
GO:0008276Fprotein methyltransferase activity
GO:0008757FS-adenosylmethionine-dependent methyltransferase activity
GO:0009791Ppost-embryonic development
GO:0009889Pregulation of biosynthetic process
GO:0009908Pflower development
GO:0009909Pregulation of flower development
GO:0009987Pcellular process
GO:0010093Pspecification of floral organ identity
GO:0010314Fphosphatidylinositol-5-phosphate binding
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0044212Ftranscription regulatory region DNA binding
GO:0048646Panatomical structure formation involved in morphogenesis
GO:0016043Pcellular component organization
GO:0016278Flysine N-methyltransferase activity
GO:0016279Fprotein-lysine N-methyltransferase activity
GO:0016569Pcovalent chromatin modification
GO:0016571Phistone methylation
GO:0016740Ftransferase activity
GO:0016741Ftransferase activity, transferring one-carbon groups
GO:0018022Ppeptidyl-lysine methylation
GO:0018024Fhistone-lysine N-methyltransferase activity
GO:0018193Ppeptidyl-amino acid modification
GO:0018205Ppeptidyl-lysine modification
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019538Pprotein metabolic process
GO:0022414Preproductive process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032259Pmethylation
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0034968Phistone lysine methylation
GO:0035091Fphosphatidylinositol binding
GO:0036211Pprotein modification process
GO:0042054Fhistone methyltransferase activity
GO:0042800Fhistone methyltransferase activity (H3-K4 specific)
GO:0043167Fion binding
GO:0043168Fanion binding
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043228Cnon-membrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0043412Pmacromolecule modification
GO:0043414Pmacromolecule methylation
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044427Cchromosomal part
GO:0044446Cintracellular organelle part
GO:0044464Ccell part
GO:0048367Pshoot system development
GO:0048437Pfloral organ development
GO:0048444Pfloral organ morphogenesis
GO:0048449Pfloral organ formation
GO:0048518Ppositive regulation of biological process
GO:0048578Ppositive regulation of long-day photoperiodism, flowering
GO:0048580Pregulation of post-embryonic development
GO:0048582Ppositive regulation of post-embryonic development
GO:0048583Pregulation of response to stimulus
GO:0048584Ppositive regulation of response to stimulus
GO:0048586Pregulation of long-day photoperiodism, flowering
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048831Pregulation of shoot system development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0051094Ppositive regulation of developmental process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051240Ppositive regulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0051568Phistone H3-K4 methylation
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0071840Pcellular component organization or biogenesis
GO:0071944Ccell periphery
GO:0080090Pregulation of primary metabolic process
GO:0090567Preproductive shoot system development
GO:0097159Forganic cyclic compound binding
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1901564Porganonitrogen compound metabolic process
GO:1901981Fphosphatidylinositol phosphate binding
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000026Pregulation of multicellular organismal development
GO:2000028Pregulation of photoperiodism, flowering
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000241Pregulation of reproductive process
GO:2000243Ppositive regulation of reproductive process
GO:2001141Pregulation of RNA biosynthetic process
GO:0090696
GO:0090697
GO:0090698
GO:0090701
GO:0140096
GO:1905392
GO:1905393

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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