result

Gene information

Detail information of g496120

Location

Gene	Chr	Start	End	Strand
g496120	Scaffold_87683:HRSCAF_470769	36717	42610	+

Sequences

CDS

>g496120.t1
ATGTGTGTCAGTGCAACTGCAGCTAGAGCACTTAAGACAGTAGTGCAAGGAATATTGCTATCCTCTGAAAGAAAGCCACTGGATTTGATGAATCTTCTGTTGTACATGGCACCTATTGTTGTTTTATTCTTACTTCCACCAAGCCTGATTATGGAAGGAAATGTAATTGCCATCACAATTGCATTAGCAAAAGATGATATAAGAATTTTATGTATTACCAAAGAAGAATTGTATTACCGTGGAGTCCGATTCAGGAGAGGGAAATGGGTTTCGGAGATAAGAGAGCCGAGAAAGACTAACCGCATTTGGCTGGGCACATACCCGACATCGGAAATGGCTGCAGTAGCGTACGACGCAGCTACCTTTGCATTGAAAGGGTCGGACAGGCTGCTTAATTTCTCGGAGTTTCTTTCATCCAGGCCCATCCCGGCTTCAGCCATCCCAGCGGATAAATGCGCTGCAGCGGCTGCAGCTGCCGCGGAGTTGTATAGGAAGAAATGGGAGGAGAACGAGAAAGTGGTACTGGAGGAGAGCAGCGATATTAATGACGATAAATACATGGATGAGAAGATGATAATTGACATGCTTAACTTGTTGGATGATATGGTGAAGGGGATGCTGGTCAGCCCAATAAGAACGAGCCCTGATCAGTCGGAGTCGAAGGATGAATGTGGTGGTTTGTGGACTTTGATGATGATGATCGCTGGATGGATAGACGATCAGTCATGGATGGTTCGATGTGGGTCACTCAATCAAGGTGGCTCGGTCGACCGGCATTGGTGGTTCGACCTCGATGGGATCAGCCTTGGTGGACTAGTTATATGGATTCGGCATTGGTGGTTCGGCCTCGATGCAATCGGCCTTGTGGATCGGCATTGGTATGCCTTTGCATTTGGATGGATCGGGGGTTGCTCGTCCTTGAAATGGGCTTGGGTCAACACTCGAACATGCTCGGGTCGGTTGGCAGTAGGTTTCAGGACAGCATTCGAATATGCTCGGGTCGTCAACTTGGTTTCAGGGGGAGTAGGCCAGCAACAAAATTATGGGTTGGCATGTTATGAACTCGAGGTCGGTCGTGGTTTCTGGGGTTCGGGTCGGCTATGGTCTTGGTGGCTCCGGACTACTCAGGAAGCCCGGTAA

Protein

Gene

>g496120.t1
ATGTGTGTCAGTGCAACTGCAGCTAGAGCACTTAAGACAGTAGTGCAAGGAATATTGCTATCCTCTGAAAGGTAATTTGACATCATCTTAGGAATTATTTTATGTAATTACATATCTATATTTTAACATGTAGTGACATTTAAGAGCAAAATAAATCCATCTTAACAATTTCGTATGATTACAGAAAGCCACTGGATTTGATGAATCTTCTGTTGTACATGGCACCTATTGTTGTTTTATTCTTACTTCCACCAAGCCTGATTATGGAAGGAAATGTAATTGCCATCACAATTGCATTAGCAAAAGATGATATAAGAATTTTATGGTACCTCCTCCTAAATTTCGCATTGGCATACGTTGTGAACCTAACCAATTTCTTGGTCATGAAACACACTAGTGCTTTGACTCTTCAGGTACATTTTTCATCCTAAAATTAAATCAAGATCAATATCTGTACATTTTGACATGCCAATATAAGTCATATTGAAAAGCTCCAAAAATTTTGTATAATGTTGTAACATCGAAAAGGTTCTTCGTAATTTGAAAGGAGCGGTAGCAGTGGTTTTGTCAATATTAATATTTAGAAATCCAGTGTCAGTCTCAAGGATGCTTAGTTACACTCTTACTATCATTGAGGTGCTTCTTTATAGTGAAGCCAAAAAGTGCCACAAACCTGATTAGTATGTATTATCCTTTTGTTGTAACTCTAGTCTGATTGTGCTGAAAGAATATTAGTTCAACATTGGAAAAATCACTGTGGGGATATATATATATATATATATATATATGTATGTATGTATGTATGTATATGTATGTATGTATGTATATGTGTATTAGTTCAACATTGGAAAAATCATGGTGGCGATATATATATATATATGTGTATATATATATGTATATGTATATATATGTGTATATATATGCGTATATATATGTATATATATGTATGTGTATATGTATATATATATATACATATATCATTTTTCAATTTTCCAGTGGATTTGTGTTGGGATGGTAGTACGTTTGAGCATATCATGAGTCCAAAATGATCTCAACTTTCAAGTTTCCAATGACTCACTCACACATTCGCACATCCAAATTTTCCTTAAAAACAACATCTGGCCATGTCTTCAGGCTCGCACGTGCATTGCAACACATGCGTTGCAAACCCATTGCTATTGGTGATTCCGCAACAGTATTACCAAAGAAGAATTGTATTACCGTGGAGTCCGATTCAGGAGAGGGAAATGGGTTTCGGAGATAAGAGAGCCGAGAAAGACTAACCGCATTTGGCTGGGCACATACCCGACATCGGAAATGGCTGCAGTAGCGTACGACGCAGCTACCTTTGCATTGAAAGGGTCGGACAGGCTGCTTAATTTCTCGGAGTTTCTTTCATCCAGGCCCATCCCGGCTTCAGCCATCCCAGCGGATAAATGCGCTGCAGCGGCTGCAGCTGCCGCGGAGTTGTATAGGAAGAAATGGGAGGAGAACGAGAAAGTGGTACTGGAGGAGAGCAGCGATATTAATGACGATAAATACATGGATGAGAAGATGATAATTGACATGCTTAACTTGTTGGATGATATGGTGAAGGGGATGCTGGTCAGCCCAATAAGAACGAGCCCTGATCAGTCGGAGTCGAAGGATGAATGTGGTGGTTTGTGGACTTTGATGATGATGATCGGTGAACATGATATAAGAATCTATATATTCTTTGTGTATATAGTCCTATTACTGAACTTTTTTAGTTTAGCCAAAACCACATTCTAGAGGAAGAACTACATTTAAATATTTTATTGTTTGTTGCAGAGTTTAGATGATGGCAAGTGCTTACAGAGGAACAATATCAGTGGAGGTATCAACTTTTATATGCTTTCATTTATTTCTATATATTGCTGGATTCTAAATTTTTTAATAGTGAACAAAAATTGTTATAGTAACCTGAATCTTAACATGTCTAAAAGAATCGTTTTTTTCATGCTATTGATATGCTTCCTGGAACGTGTTATAGTTACACCACATGGTTGTAAATACAGGACAATAGATAACATAATGAGATCAATATGTTATTTGCATTATGTTCTTTAAATGTTTCTAAGTTATTATAATAGTAGTTTTTGCATGCCCTTTATTTTGTGCTTCAAGTTTTCCAACTAAGTTTTTAAACATGGGTGTTTAGTATTTTATCTTAACCATTTCATCTAATTCATTGATGTGGTTGTCAGCAATTTACCGTTACTAATGTTGCATACTATTTTTTTAGCATTCTTTCAGTGAATTAATTGTATATCTATCATTTATTTAATGAAAGTATTTGTTTTTAATTCTTTAGATTTTTTCATATTAGTTGAATCAATTTGGGTTGATTAGATGTTTGCATATTGATTGCATCATTACAACATATATAATAATAATAATAATAATAATAATTTATGTATAAGATAAAATTTGCACCCATGCTATTGGCACGGGCTTCCTACTAGTACATATGATATAGTTAATGATTGTCCACATAATAGGTAAATGAATTTTTTTGATAAAGTGAAATTCTTATTATAAATTCATGAAAGTAGCCAGCTGAAAAGGTTCTCCTTGATGTTTCGGTGTAGGAACTCAATTTAGAAAAGAAATTGTATTGTAGTTTTTGATATAATCAAAACAAAAATCCACAATAATAACTAACGGGTTAACTAAAGAGAGCTTAGCTTGGTGATTTATATATTTGAAACAATAAAAGCAAATCAAAGATCCTTCAGACACTTACCAATTTTTGCACCATGTACGAAAATATATTAAATAACGTTCAAAAAGGAAATCAATGAGAAAAACTAATTTGGAATCAAATATTTGATGAGCATTAAATGAATGTACGAGTCGAAGATAAAATAATAAATCTATTAAAGTATTGATTTAGATAATTGTTGAATAAACATGTTAAAATTCTATAGATGTTAATAGTATATACTTAGTAATAAACTTATATTCAAACTTAAAAAATTGATGCAAAAGTTAAACAAGTTGAATAAATAGGAACATGATTAAAGGACAATTCTTTATTATATTTTTTTAAATTATTAAAAAAATACATCAGTGATAAATATAACTTGTAAATATAAATAAACATCTATGCCTTACACTATATACAGCGTATATCACTGTCACAACTTTAAAAAAACTATTACTAATGATGCAAGCATACATTGTAAAAAAATACCTTGCCCTTATTGACTATTTTTTGAATTTTATGCAATTGATTTTTGGGTATGCTAATGACACAAGCATTTCGTTTTCCTTGGCATGCTAATAGCGAGTTTTATGGAAATTCGTATGCTTGGTGTATTTTAATATTAACTATTGTTACGTCCTTGCGTACACTTAAGTAATACCATTCACAAACCATTTTGATTATTCCTTCACTTGTCTCCATTATGAAATGAGATTCTTATTAATTGATGGAAAAGTGTCAAACTCTTGTTTTGCTAAGAATTATTAGAAGTTTACCAAATTTTATGATGCTTTTTGGTGTTATGACTTTATCTGATCAAATTGGAACACCAGTATAGCTAGCTATATGAGATAAAGCCTCATTGTTCTAGAATTCTATATTCAAATCATGTATGTTCATCTAGATTTTTATTTTACCAATCTTCTCATTTTCATAGTTAAATCTAGGAACGCATTTCTGAATGGTTATAAAGTTTCCAAAGTAAGTAAAAGGACTTTTTCTATTACAGGTTGAAATTCAGATCCGTCTTCAAACTTTACTGCCTCATATCAATTTTTTTGAGTATGAATTGCAAAATCAGATGTTGGCATCCATAATTTTCTATGTAAGTCTTTAGTCTGAAATGAGTATTCTAAAAACCAATGGGAATAACTATTATTGTGTTTACCCATTGCAAAGTGCTCAGTTTTTATTATCAGATTCGGACAATACGATTTTCAAGTACAATAAAGCTTTTCTTTTGTCTGCTTTATAAACTGAGCATTGTTTATGTATATGTAGGTTTTAACTAAGAGTTGCAAAAGAAAAGCAAGAATCAAAAGCCTGTAGAATTTGGTCGTGTTAGTAGATGAAAGTTTTGTAGTTTGGCCGAAAAGTCGCATTCATTGTTTGTAAGCTTTTAATGTTTTATACTAGTAAAACTTGAAGTTATCATACAATAAACTTTGTAGGATTGGTATGAAAGTATATAGTATGCATGATGTTTGTTTTGAAATTTGGTGATATGTTGGTTTTGAAATTTTCTTATATGTTTGTTGTTACTATAAATTTGAATTTGTATTGTTGAACGAAATATGTTTACTGCTTGTTGTTACATGATATACGGTTTAACTATACCAAATTTGCAACACTTATAAGTGTTGGTAATTTTTCTATTTACTTATGTGCGCGAGGAATTCCCAACAGTTATAACCATTGGAAATTAAAAAATTCCCAATGGTTATAACCGTTGGGAATATGAAAATAGTTGTAGGTTATAACCGTAATTTCCAACTGTTATGACCCTTGGAAAAGAAAATTTTCCAATGGTTATAACCATTGCAAAATATGTAGAAAAATTATAATGTACCTGCTACCAACGGTTCTTTAACCGTTGGGAATTTGATTGCCAATGGTTGTAACCGTTATAAAATGACAATTCTGGTGTTATTTAAACGGTCAAACAATTCAAAAGAAAATCTGTACTACATCATCATAACGAACTCTTTACAAAAGAGCATTCGATTATCCTCAACATTTAAGGATATCATATATGTTGCACATTATGTAAACTGGTAAAATTCTTATATCTTTCTTATATTTTTGGTATACTATTACATTTAACACAATATGATTTTTTTATAATCAATCAAATTGAATACTCGATCTCGCACTATTGTTCATTTGGATTTTCGGATGAACTAATTTCATCGAAATATTGTATATTACGAATTTAACTGTTCACCATATAACATTTATATGCAGTAATATATGGATCAATTATCCATGGTCTTGTATTGCTTTTACAGATTGAAACTCATAGAATGCAATACACAGTCTCGACCAAATAAACATGTAAGCGACCAAATTACGAACGTGTTTAATAGTTTTAAAATCCAGTGCTTGCATGGTCTTACCCGGCCATTTGGAAAGGTCGTAGGTAGGTGGAGTTAACTAAATCGACTATTCGTTTACCGAGACTGGAATATGATGGGTTTGAGCCAGCTGGATGGATAGACGATCAGTCATGGATGGTTCGATGTGGGTCACTCAATCAAGGTGGCTCGGTCGTACATGGCTCAGTCATAGAGAGGAGATCATGCATGGGTCGACCCTTCGAAGGGGGTCGGTTATCCTTGGTTCGGCCATATAGGACCGGCATTGGTGGTTCGACCTCGATGGGATCAGCCTTGGTGGACTAGTTATATGGATTCGGCATTGGTGGTTCGGCCTCGATGCAATCGGCCTTGGTGGACTAGTTATATGAGATCGGCATTGGTAGTTCGGCCTTGATGGAATCGGGTTTGGTGGTTCGTCATGTTCTGTTTCGATTATACTGAAGTGGATCGGCATTGGTATGCCTTTGCATTTGGATGGATCGGGGGTTGCTCGTCCTTGAAATGGGCTTGGGTCAACACTCGAACATGCTCGGGTCGGTTGGCAGTAGGTTTCAGGACAGCATTCGAATATGCTCGGGTCGTCAACTTGGTTTCAGGGTTGGTCAATATGATGGAGTGGGGGTTATTTGCTTCGGGTCGGTATTTACATATCCTCGGTTCGGCATAGGGGAGTAGGCCAGCAACAAAATTATGGGTTGGCATGTTATGAACTCGAGGTCGGTCGTGGTTTCTGGGGTTCGGGTCGGCTATGGTCTTGGTGGCTCCGGACTACTCAGGAAGCCCGGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	KAA3456476.1	2.8e-26	ethylene-responsive transcription factor ERF027-like protein
Swissprot	Q9CAN9.1	1.7e-25	Ethylene-responsive transcription factor ERF026
trEMBL	A0A5B7BZQ6	1.5e-26	AP2/ERF domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G36450.1	50.00	6e-25	112	HRD	Integrase-type DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g496120	AT2G36450.1	148	62	3	79	214	15	162	50.00	6e-25	112
g496120	AT5G52020.1	167	73	4	79	229	65	230	46.11	1e-23	107
g496120	AT3G11320.1	70	19	0	1	70	161	230	72.86	9e-23	104

Ortholog group

Species	Genes
Allium cepa	g279991.t1; g316213.t1; g316214.t1; g406180.t1; g431856.t1; g496120.t1
Allium fistulosum	AfisC8G02888
Allium sativum	Asa1G02393.1
Arabidopsis thaliana	AT1G12630.1; AT2G36450.1; AT5G52020.1
Oryza sativa	LOC_Os02g45420.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	79	126	38.2	1.2e-09

Gene Ontology

Accession	Ontology	Name
GO:0001067	F	regulatory region nucleic acid binding
GO:0006790	P	sulfur compound metabolic process
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006952	P	defense response
GO:0050832	P	defense response to fungus
GO:0005488	F	binding
GO:0006082	P	organic acid metabolic process
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0008150	P	biological_process
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009620	P	response to fungus
GO:0009889	P	regulation of biosynthetic process
GO:0009987	P	cellular process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0016143	P	S-glycoside metabolic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019748	P	secondary metabolic process
GO:0019757	P	glycosinolate metabolic process
GO:0019760	P	glucosinolate metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0043207	P	response to external biotic stimulus
GO:0043436	P	oxoacid metabolic process
GO:0043565	F	sequence-specific DNA binding
GO:0044237	P	cellular metabolic process
GO:0044281	P	small molecule metabolic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051704	P	multi-organism process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:0098542	P	defense response to other organism
GO:1901135	P	carbohydrate derivative metabolic process
GO:1901363	F	heterocyclic compound binding
GO:1901564	P	organonitrogen compound metabolic process
GO:1901657	P	glycosyl compound metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network