result

Gene information

Detail information of g497034

Location

Gene	Chr	Start	End	Strand
g497034	Scaffold_87776:HRSCAF_470862	19515	22366	+

Sequences

CDS

Protein

Gene

>g497034.t1
ATGGCATCATCAATTGCATCTACCGCTAGAAAGAACCCTCTTGAATCTATAGACCCATTAATCAATTTCAATAAATTTCATCACAATCAGAAGATCAAAACTATAAGGCAAGTCCTTCTCCAAGATTCCGACAACGAATTTGCAGACTCCCATTACATGAAAAAAGCTGATTTGATCGATCCTGTTCTTGAAGCAGTAAAAGAACTAGCTTCTGATCAATGCTCCATGGCTAGCCAGTTCTATGAAAGTGCTCGCAGCAATAGTTTTTCTCAGTACATTGAACCAGCAAAAGATAGTTTTACAACTGCCCGAATTTCTATGGCGACTACTGCAGCAGGTAGTGTCAAGAACGTAGTGGAGGAACCATCAGGCAGTGGTTCGGTCAGTGGATCGGGCAGTGGTTTGGGGAGTACAGGCAGCGAGATAAGTGAGGAGACCAGTTTGTCATCTGGGATTATCAGTACATCATCAGGGCTTAACAATAACGCAAATAAGCCTCACAAAGGCAATGATTCAAGATGGGAAGCGATTCAAACTGTACGAGCAAGAGACGGGAGTATTGAGTTGAAGCATTTTAGGCTGTTAAAGAGATTGGGATGTGGTGATATTGGAAGCGTGTACTTAGCTGAATTGAATGGCACACATAGCTATTTTGCTATGAAAGTTATGGATAAGGACACTTTAGAGGCGAGAAAGAAGCTTCCGAGAGCGCAAACGGAGAGAGAGATACTGCAGTGTCTTGACCATCCTTTTTTGCCTACGTTGTATACACATTTCGAGACTCCAAAGTTTTCTTGTTTGGTTATGGAGTACTGCCCTGGTGGTGATTTGCATGCCTTGAGGCAGAGGCAGCCAGGGAAGTATTTTTCCGAGCAAGCGGCTAGGTATGTTTTTTTGATTAATTTCTTGATTATATTATTTTTATGCAGTTATGATTAGATCAGTTCTTGTGAATTTTGCTATGCCCTTCCTTCCATATACCATGACCTCTTGATTTTTAATCCAGTAACTAGTGCTAAAACTATTACAAAAAGTCACCATCTTGTGCATAATGGTTGTATGCTTTATTATGGTACTTTTGTTCTTACAATGGCATACACTACAAATTGTTATGGACCTTAGTGTGTATATGAGATCATAGATGTTGTATCAAAGGTGCCATGAAATTATAGTGATACGAGAATTGAAGTGAACATCTATTTTATGACGCTTGTTGTATTGTTGGAAATTCCACTAATCCTCAACAGAACGAAATAGTCCTTAATCCTTGTAGACTGGCATGATTTCGGGATAAGTAACCCTTATCCTGAATAAACGGACTTGATTTGGTGTTTTTATTCAGTTTTGTACCTTAGATTAGAAGGTTTGATGAAAGGTCATGTTTGTTTGTTTATGGGAAAGAGATTGCTTACACCACCTACCCAACACCCCAATATTTTTTTTAGTTTTATAATTCCAAATAAAACAAATTTTACAGATATTTTCTAATGCTATTAAAGATCGTTTTAAAAACTAAAATACTTATATTTATGGTAAGTGAGAGAGCAGTAAGTTCCTATTTTCTTCTAAGTCTTTTGTTTGCTAGCAATGGCATATAATTCGGTCCACTTTTTCCACTTATATTAACTCTTTCCAACTGTTCCAAAACTGCCTAGCTGTATCACTGTGTACCACTTCAAATGTTAATTAGGGAAGTGGGGTTCATATTTGTTGATGACAACCCAAACGTGCTCGCACATTCTAGTACTTTCACTCAATCAATCCGTTGCTTTATATGCATCTCTTCACTCCACGTTTGTCAAGTACACGTTACAGCTAAATAACATTTCTCACAACTCTTGCTTATGTCGACAACATGATGGACATTGCCTACATAAACTGCCTACTTTGATGGACCCTATATGTTGGAAGTAAAGCAAGATATAAAAACATACATTGGTTGGGCATGCTTGAACTGTATGGGCAACCATAAATGTGTCATATATAATAGAAACTTAGTCATGGAACTTATATTCAATAATTGATTCAAATGCAGGTTCTATGTGGCTGAAGTCCTCCTAGCATTGGAGTACCTGCACATGCTAGGCATAATATACAGAGACCTGAAACCTGAAAATGTACTGGTCAGAGAAGATGGACACATAATGCTTTCTGATTTCGACCTCTCTCTTAGATGCACTGTATCTCCTACACTAGTTAAATATTCCAAGTACGCCACCTTTGACAGCAATGCATCTTCCAGCTACTGCTCTCAGCCAGCGTGCATCGACCCACCTGCATGCATGCAGCCTGCCTGCTTTGCTCCACGCTTTCTCAAAACTTCCAATCAAAAGACAAGTACCAACGACTTTGCATCGTCATCCTTCCGAACACTTCCGGAACTTCTAGCAGAGCCCACGAGCGCCCGCTCCATGTCCTTTGTCGGGACCCATGAGTACCTGGCGCCAGAGATAATAAAAGGGGAAGGGCATGGAAGCGCGGTGGACTGGTGGACTTTTGGGATATTTTTGTACGAGCTGCTGTTCGGGAAGACTCCCTTTAAAGGGTCTGGGAATAGAGCGACTTTGTTCAACGTTGTAGGGGAGCCACTGAAGTTTCCAGAAGCTCCCAACGTGAGCTTTGCAGCAAGGGATTTGATAAGGGGGCTGCTTGTGAAGGAGCCTCAGCAGAGGTTGGCCTACAGACGTGGGGCCACAGAGGTGAAGCAGCATCCTTTCTTTCAGAGCGTGAACTGGGCTTTGATTAGGTGTGCAGTCCCGCCTGAAGTTCCTAGAGTTCAGGTTAGGAAGAATGGATCTGTGGTGGTTGATGTGGAGACTGATGGTGCCTATGTGGACATGGATTTCTTTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK56809.1	1.4e-175	uncharacterized protein A4U43_C10F13230
Swissprot	P15792.1	3.8e-162	Protein kinase PVPK-1
trEMBL	A0A5P1E2X2	1.0e-175	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G47750.1	68.39	0.0	637	D6PKL2;PK5	D6 protein kinase like 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g497034	AT5G47750.1	465	128	7	97	552	102	556	68.39	0.0	637
g497034	AT4G26610.1	440	113	7	137	566	77	506	69.77	0.0	630
g497034	AT5G55910.1	411	99	4	137	541	62	464	72.51	7e-177	617

Ortholog group

Species	Genes
Allium cepa	g497034.t1
Allium fistulosum	AfisC3G03386
Allium sativum	Asa2G02828.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	193	347	131.0	4.6e-38
PF00069.22	Pkinase	Domain	420	523	76.8	1.5e-21

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0000902	P	cell morphogenesis
GO:0000904	P	cell morphogenesis involved in differentiation
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005488	F	binding
GO:0005543	F	phospholipid binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005730	C	nucleolus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0008289	F	lipid binding
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006810	P	transport
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0009914	P	hormone transport
GO:0009925	C	basal plasma membrane
GO:0009926	P	auxin polar transport
GO:0009987	P	cellular process
GO:0010015	P	root morphogenesis
GO:0010053	P	root epidermal cell differentiation
GO:0010054	P	trichoblast differentiation
GO:0010540	P	basipetal auxin transport
GO:0010817	P	regulation of hormone levels
GO:0016043	P	cellular component organization
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016323	C	basolateral plasma membrane
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0021700	P	developmental maturation
GO:0022622	P	root system development
GO:0023052	P	signaling
GO:0030154	P	cell differentiation
GO:0031974	C	membrane-enclosed lumen
GO:0031981	C	nuclear lumen
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032878	P	regulation of establishment or maintenance of cell polarity
GO:0032989	P	cellular component morphogenesis
GO:0035091	F	phosphatidylinositol binding
GO:0036211	P	protein modification process
GO:0043167	F	ion binding
GO:0043168	F	anion binding
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043228	C	non-membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043232	C	intracellular non-membrane-bounded organelle
GO:0043233	C	organelle lumen
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044422	C	organelle part
GO:0044424	C	intracellular part
GO:0044425	C	membrane part
GO:0044428	C	nuclear part
GO:0044446	C	intracellular organelle part
GO:0044459	C	plasma membrane part
GO:0044464	C	cell part
GO:0045178	C	basal part of cell
GO:0048364	P	root development
GO:0048468	P	cell development
GO:0048469	P	cell maturation
GO:0048731	P	system development
GO:0048764	P	trichoblast maturation
GO:0048765	P	root hair cell differentiation
GO:0048766	P	root hair initiation
GO:0048856	P	anatomical structure development
GO:0048869	P	cellular developmental process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051179	P	localization
GO:0051234	P	establishment of localization
GO:0051716	P	cellular response to stimulus
GO:0060918	P	auxin transport
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0070013	C	intracellular organelle lumen
GO:0071695	P	anatomical structure maturation
GO:0071704	P	organic substance metabolic process
GO:0071840	P	cellular component organization or biogenesis
GO:0071944	C	cell periphery
GO:0090558	P	plant epidermis development
GO:0090627	P	plant epidermal cell differentiation
GO:0098590	C	plasma membrane region
GO:0099402	P	plant organ development
GO:1901564	P	organonitrogen compound metabolic process
GO:1901981	F	phosphatidylinositol phosphate binding
GO:2000114	P	regulation of establishment of cell polarity
GO:0140096
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08286	E2.7.11.-; protein-serine/threonine kinase	EC:2.7.11.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network