result

Gene information

Detail information of g5004


Location
GeneChrStartEndStrand
g5004CHR12676593126773465+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020252214.18.9e-62NAC domain-containing protein 100-like
SwissprotQ9FK44.11.9e-56NAC domain-containing protein 87
trEMBLA0A5P1FJB16.4e-62NAC domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G18270.267.553e-58 223ANAC087Arabidopsis NAC domain containing protein 87

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Ortholog group
SpeciesGenes
Allium cepag109343.t1; g109457.t1; g123456.t1; g153581.t1; g158088.t1; g174004.t1; g186872.t1; g241298.t1; g291605.t1; g302806.t1; g323303.t1; g32625.t1; g329718.t1; g344327.t1; g362334.t1; g397143.t1; g39828.t1; g406671.t1; g410599.t1; g419260.t1; g428756.t1; g428758.t1; g432019.t1; g44922.t1; g478698.t1; g49063.t1; g5004.t1; g510891.t1; g519997.t1; g526879.t1; g531904.t1; g539580.t1; g540186.t1; g540188.t1; g54139.t1; g75730.t1
Allium fistulosumAfisC1G03692; AfisC2G06841; AfisC3G00146; AfisC3G01202; AfisC3G02742; AfisC3G02749; AfisC6G00348; AfisC7G05081; AfisC7G05355; AfisC7G05573; AfisC8G04411; AfisC8G04884
Allium sativum
Arabidopsis thaliana
Oryza sativaLOC_Os11g40630.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily14226473.12.2e-20
PF10536.6PMDDomain35747473.31.8e-20

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0008150Pbiological_process
GO:0009889Pregulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009894Pregulation of catabolic process
GO:0009896Ppositive regulation of catabolic process
GO:0010271Pregulation of chlorophyll catabolic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031329Pregulation of cellular catabolic process
GO:0031331Ppositive regulation of cellular catabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048831Pregulation of shoot system development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0051094Ppositive regulation of developmental process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051193Pregulation of cofactor metabolic process
GO:0051194Ppositive regulation of cofactor metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051240Ppositive regulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0090056Pregulation of chlorophyll metabolic process
GO:1900055Pregulation of leaf senescence
GO:1900057Ppositive regulation of leaf senescence
GO:1901401Pregulation of tetrapyrrole metabolic process
GO:1901403Ppositive regulation of tetrapyrrole metabolic process
GO:1901404Pregulation of tetrapyrrole catabolic process
GO:1901406Ppositive regulation of tetrapyrrole catabolic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903648Ppositive regulation of chlorophyll catabolic process
GO:2000024Pregulation of leaf development
GO:2000026Pregulation of multicellular organismal development
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110
GO:1905623

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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