result

Gene information

Detail information of g507385

Location

Gene	Chr	Start	End	Strand
g507385	Scaffold_89063:HRSCAF_472149	326900	332088	-

Sequences

CDS

Protein

Gene

>g507385.t1
ATGAAGATTTCATGCGTGGATGAAGAAGAGGAGAATCATCAACAAAAAACGGTTGTTGTTGGCGTAAAAATGGATCCTCAGAGCAAAGAGCTCTTAACGTGGGCGCTTGTTAAAGCAGCTAAAGTAGGAGATAGAGTAGTGGCACTTCATGTGATTCCTACAAATTCAGGTACTTTTGATCCAAACCCATTTGATGAATTCCGGTTTTGTTTTGATTGATTGATTAAAGACCGGAATTTGTGTTGCAGAGGTTTATGGTGGAAAAATTTCTTCTCTTCTGTCGATCGTGAAAGCTTTTGATTCTCTTTTAGCTGTTTATGACGGGTTCTGTAATCTTAAACAGGTTCGTGTTAATAATTATATATCTACCACTGAACTCCATTTTTTGAACGAGTACATTTTGCGACTATTGAGTAATAAATTTATGTTTATGCAGATCGATCTGAAGCTAAAATTGTGCAGAGGATCTTCTACAAGAGAAGTTTTAGTTCGCGAATCAATTTCTTATGGTGCTAATAGTCTTATATTAGGCGTTAAAAGAAGTAACTGTAAAATAAGGTGAGCATAACAAATTTCATTTTGTACTTTGATTATTGATTTTTAGTGCTCATATCTGTTAATTTCATCAGGCTAATTTATTGTTTTTGATAGATATTTATCCACCTCAACGGCAAAGTACTGTTCGAAAAAATTATCTAAAGATTGTTCTGTACTAGCAGTTAATAATGGCAAAATTTTGTACCATAGAAAGTCTACAGGTATATTTTAATTCACTTATCTTATTTTAGTTTCACTTACCATCACAAATTAATAAGCTTGCCTTAATTTAAATGCAGAATTGAAGCAATCCTTGAAGAAACAAAAAGATGAAAGCCATAATTATCTGTTTACGACTGATGAACGACTAATAAAGAATCATGACCCATCTAGGCTTTCTTTACAGTGTTTTCCTTTCTCTTCACTGTCTCATTCATTTACGCTTAAAGAAGAGAATGATCAAGATTGTAGTGATTTGAGAGAGAGCTGTTCTTTGGATTTAGTCCCATTAAATAAATCCGAATCTAAGTCAAACTCAAACTCGATTCGTACTCTTATTGTTCGTGAGTTGGATGAAGCAAAACCACTGAGAAAAACTGTGTTAAGTGACAAAAGTATAAGAGATGGGGATGAAAAGTCTAAAGTTTCTGTTTTTCAATGGGCAAGGAGACTTCCTAATCAGTATATGGCACCAACTATTGGTTATTCAGGTGGTAAAGCGGTAGTTCCTTTTGAAAGAACTGATTCATCATGTTCATCTGTTACAATGTGTGAAGAAGAAAATGAAATTCCAACTGAATTGAAATCTCTTCAAAAAAAGCATTCGTCAGTTTGTAGGTTGTTCAGCTATAAGGAGCTTGTATCTGCAACATCTAATTTCTCTTCAGGTGGCTCTTTATATTTTATTGATTTGATAACTTAATTAAGAGTATAATCTGAGTACAGTTATTTATAATGTCAAGCTTTAGCACTACTATATTTGGGAGTTAGAAATGACTATGTGAAGCAAAATGATACATATTGAGAGCATCAATAATATTGTCACCGTGTCTAATTAAATATCGAGAAGATCAAAAATGCTACTTACCGGGTTTAAGTTAATAAATAGTTACCAAAACTATACATGTTGAGAGGATTGAAGGTGTATATTAATCTTGTTATTCAATATATATTTAAATGCGTGGTGCAGATAATTTGATCGGGAAAGGAGGCAGCAGCCAAGTATATAAAGGATATTTATACAAGGGAGAAGAAGTAGCAGTTAAACTGTTGAAGCAATCCGAGGATGCAGTGAAAGTTTTTGTATCTGAAATTGATATTATCACTACACTGCATCACAAGAATGTTATCTCTCTACTTGGTTTTTGCTTTGATAGTGACAATCTTATATTAGTCTATAATTTCTTATCAATGGGTAGCTTGGAAGAAATTCTTCATGGTAATTTTTTCTATTAAAATACAGTTTATGACATTGATGCATGTCTTTTTTTTCCCCTTAAATCTAACTTTGTTTTGAATGTTTTATCCTTATGCTAGGCAATAAAGGGACAAACAATGTTCTAACTTGGGTAGAGAGATACAAGATTGCATCAGGTGTAGCAGAAGCACTTAATTATCTGCATAATGATAGCAGTACTCAACCTGTGATTCATAGGGATGTTAAGTCCTCAAATATCCTCATAGCCGATAACATCAATCCTCAGGTATAAATAAATAGTATAACCTCTTTAATTTGTTTTAACTTGGAAGCATTTTTGTTTACATTTGCTTGGTTTAATCACTTCAGTTGGCTGATTTTGGACTTGCATTGAGGGTATCACCATCTTTGTCACATATGACATGCAATGATGTTGCAGGGACATTCGGGTTTGTGCTATACTGCTGCTTTATATTTTGTTTAAATTTTAATAAATAGGTTTTTTGTTCATGAATTTACTGTATTTTAATGTTAGGTATCTGGCTCCTGAATATTTTATGTATGGAAAAGTCAATGATAAGATTGATGTGTATGCATTTGGTGTTGTTCTTCTTGAACTTCTTTCTGGAAGGAAACCCGTCAATTCTCAATGTCCTAAGGGTGAAGAGAGCTTGGTATTGTGGGTATGTTTTCATGCACAGTGTACTTACTTATCAAATATTAACTTAATATTGTTCCATCTCATTAATTGGTGTGCTTAGTTAACCATACACTAATTTATTATTTTTTTGGAAAATTCAATCCAAACACCAATAATTGTTTTACCTACACCATATTTTTTTTTATAAAATATTAGACAAGAATTCTCATATATCTAATAATAAAAAAAATCAATATTAAAGAATCACTAATCAATATTATTTCTTTCAAAAGCAATCATCGGATGAATTAAAGTTGAATTCCTTTTGGGTATCAAGTTCTATTTAAAAAGTATCAAGTTGTTTTTGTGCGAGGTCAATTTTAACAATTTCCACTTCAAATTAAAGATGAAATATAAAATTTTAGATTTATTACGAAAATTAATATGATTCATAGAATACTAAATTATTCTCTATCTTATACTTAAATTAAATCAAGTTTAAATTTAACATCAAAATTTAGTAAGGTTAACATGTTAATATTCAGAAATTTAATTTAATTTGTTGTATTTAAATAATTAAATAAATTTGAATTCCATTTGAAGTATTTGAATTTGAAAAATGAAATTTGCAAAAGTGAATTTGGGAAACTTAGTTTGATTAAAGCATGAAAGAGAGAGAAATTTAGTGAAACGAGATAAGGCTGTTTATTCCAAATGAGGGTATTTTTGTACTATGTTTTGTGTATATTAAGTAAAAAATGTGAATTGGATTTTAGCAAATTTTTCGGTGTATGTATAGTGATCTAAGGTGTATGAACAGAGTAGGTATTATTTACCAAAAAATTACTTAGGCCCTTAAAGAAATAAAATCGAGTGGAGTGGTTTAGTTGTATGAATTTTAAAATTTGAACATTATTAATTGGGGAAAAAAAAAGTATCTCCTCTTATAAAAACATAATACCTTTAGTAGTTTGCCATCACATTTATTTATTTGTGCATTTTTATACAGATCCTAGTTTTAAAAATTTGCATGTGCAAATATTCGAATATTTGGAATCATTATTTACCATGATTACAGATAATTTATTGAAGTTTTTTATTTCAACTCATTTATGGATGTTTCCTTATTAAGGGGTCTAATTTGTTGAAGTTTCCCAGTCCAGAGATTTAGTAAATTGAAGTTTTCCAATATATCAAATCAAAACCAAATATATGTTAGGGATTTGAAAATTTGCTCGATTTAGCATTTTAGTTAGATAGAGACGAAAATGAGAGATCAAAAGAATATAATTTGGGATGGGGCCTTAATTTTATCTTTTTATGGTAAAAGCAAGAAGGATAATTTGGTCCTTTTAAACTATAAACTACAGTACAAAAATGGAAATATTCCCTTATTGATTATTATTCTTGTCGCATAAATTTCATTTTTCATAACCATTGTGTTTGCCCTCTTAGTAACTTTAATTTATTATATCAATTGATGTTCACAATTATGGTACTAAAACACCAACACGATACGCTTCTAATAAACCAATATAATACACGCACATTAGTTATTTTGTTTTCCAGAAAATATAATCTGCAATTATACCCAACAAAACGCTAGTAATGCGTGGAGTTTTCTCATGGGGATAGAAACCTAAATTATGGTAACTACCGCAAGACCAATAAATGTGTCACGTTATATTGATTTAATTAGATAATCACGTAATTATCAGGAATGAAAACACAATATTTGGATTATTTAATACTTGCCCTTTAATATTTGGTTTTGTGTTAAAAATTAGTAGAGATTTCACAGAACTGGAGATCAGTATTCAAGTTATTCCCATATTTCTCAAAATTAGCTGATGCAAAATCTAATATTTAGCTAGAGTGTATTACATATCAGTACGTTCAACTACATGTCTAAGGAGCTGCACTACAAAAAAAATTATACCAAGGCCCCCGATACTATAATAAAATGTACAAATTTCAGGCAAAGAAAATTCTACAAGATGGAAAAATGAAGCAGCTGGTTGATCCATTCTTGAAAGATGAATATGATAATGAAGAACTGGAAAGGATGATTTTAGCCGCTTCCATTTGTATTAGAAAAGATCCTCGATCACGACCTCCTATAGCTCTTGTAAGATTTCATGACTCTTCTTTTCCTTCCTTCCTCTTTTAACAAAACTTTTAACATATATCATCGATGAAACCCTTTATGGAATATAATTCTTATACTTTCATTCAAGAGTACTTATGATCTATTTATTAGCATGATATTGTTTTAATATGCTTAAGTATAATATTTTTTGCTTTATATGACAATGTCCAACCTAATTTCAGGTTCTAAAGCTGCTACAAGGTGATCCTGACATCATTCGATGGGCAAAAATGCAAGACAGCAAGGAAGAATCCGATGAACTTGAATTCGACACATCGCCTTTGAATTCTAAAATTCAGTCTCACATCAACTTAGCTTTACTCGGTGTGAATGATGATACCTTCTCATCATGCAGCGTTGGTACCTCAGTTGATTTTATCAACGCGAATGCTTCTCTTGAAGATTATATTAAGGGAAGATGGAGTCGCTCTTCGAGTTTCGATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020245982.1	3.2e-241	receptor protein kinase TMK1
Swissprot	Q9SGY7.2	8.2e-61	Proline-rich extensin-like receptor kinase 11
trEMBL	A0A5P1E7Z8	7.3e-224	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G77280.1	48.91	0.0	659		Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g507385	AT1G77280.1	779	296	18	10	712	42	794	48.91	0.0	659
g507385	AT1G21590.1	763	323	19	17	712	13	756	46.40	2e-165	579
g507385	AT5G63940.1	724	332	14	18	712	22	703	44.34	9e-159	557

Ortholog group

Species	Genes
Allium cepa	g507385.t1; g67799.t1
Allium fistulosum	AfisC2G01531; AfisC3G03693
Allium sativum	Asa2G02981.1; Asa6G05432.1; Asa6G05433.1
Arabidopsis thaliana	AT1G21590.1; AT1G77280.1; AT5G63940.1
Oryza sativa	LOC_Os11g08950.1; LOC_Os12g07990.1; LOC_Os12g08050.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00582.23	Usp	Domain	16	150	37.9	2.1e-09
PF00069.22	Pkinase	Domain	360	625	156.3	8.7e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0007165	P	signal transduction
GO:0007178	P	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0007154	P	cell communication
GO:0007166	P	cell surface receptor signaling pathway
GO:0007167	P	enzyme linked receptor protein signaling pathway
GO:0008150	P	biological_process
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0009611	P	response to wounding
GO:0051707	P	response to other organism
GO:0009620	P	response to fungus
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0038023	F	signaling receptor activity
GO:0043170	P	macromolecule metabolic process
GO:0043207	P	response to external biotic stimulus
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0046777	P	protein autophosphorylation
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network