Detail information of g508956


Location
GeneChrStartEndStrand
g508956CHR5141054917141081345+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020249684.13.4e-174SNF1-related protein kinase catalytic subunit alpha KIN10-like
SwissprotQ38997.33.8e-162SNF1-related kinase 1.1
trEMBLA0A1R3L7L02.5e-174non-specific serine/threonine protein kinase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G01090.256.423e-166 582AKIN10;KIN10;KIN10;SNRK1.1SNF1 kinase homolog 10

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag508956.t1
Allium fistulosumAfisC5G02628
Allium sativumAsa4G04504.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain62313259.23.4e-77
PF00627.28UBADomain33537121.20.00018
PF02149.16KA1Domain50454434.89.2e-09

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0008152Pmetabolic process
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003824Fcatalytic activity
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0007165Psignal transduction
GO:0035556Pintracellular signal transduction
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0007154Pcell communication
GO:0007275Pmulticellular organism development
GO:0007568Paging
GO:0007584Presponse to nutrient
GO:0008150Pbiological_process
GO:0009593Pdetection of chemical stimulus
GO:0009594Pdetection of nutrient
GO:0009605Presponse to external stimulus
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009738Pabscisic acid-activated signaling pathway
GO:0009743Presponse to carbohydrate
GO:0009755Phormone-mediated signaling pathway
GO:0009756Pcarbohydrate mediated signaling
GO:0009791Ppost-embryonic development
GO:0009987Pcellular process
GO:0009991Presponse to extracellular stimulus
GO:0010033Presponse to organic substance
GO:0010050Pvegetative phase change
GO:0010150Pleaf senescence
GO:0010182Psugar mediated signaling pathway
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019538Pprotein metabolic process
GO:0022414Preproductive process
GO:0022622Proot system development
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0031667Presponse to nutrient levels
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0036211Pprotein modification process
GO:0042221Presponse to chemical
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048364Proot development
GO:0048366Pleaf development
GO:0048367Pshoot system development
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051606Pdetection of stimulus
GO:0051716Pcellular response to stimulus
GO:0065007Pbiological regulation
GO:0071215Pcellular response to abscisic acid stimulus
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071322Pcellular response to carbohydrate stimulus
GO:0071396Pcellular response to lipid
GO:0071495Pcellular response to endogenous stimulus
GO:0071704Porganic substance metabolic process
GO:0080022Pprimary root development
GO:0097305Presponse to alcohol
GO:0097306Pcellular response to alcohol
GO:0099402Pplant organ development
GO:1901564Porganonitrogen compound metabolic process
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:0090693
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K07198PRKAA, AMPK; 5'-AMP-activated protein kinase, catalytic alpha subunitEC:2.7.11.11 Apelin signaling pathwayko04371
FoxO signaling pathwayko04068
PI3K-Akt signaling pathwayko04151
AMPK signaling pathwayko04152
mTOR signaling pathwayko04150
Autophagy - animalko04140
Tight junctionko04530
Insulin signaling pathwayko04910
Glucagon signaling pathwayko04922
Adipocytokine signaling pathwayko04920
Oxytocin signaling pathwayko04921
Axon regenerationko04361
Longevity regulating pathwayko04211
Longevity regulating pathway - multiple speciesko04213
Circadian rhythmko04710
Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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