Detail information of g509784


Location
GeneChrStartEndStrand
g509784Scaffold_89330:HRSCAF_472416270450278878-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008791435.12.7e-292LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
SwissprotQ8RWZ5.15.2e-115S-domain-2 (SD2) receptor kinase 5
trEMBLA0A8B7C4661.5e-273Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G32300.135.041e-122 438SD2-5S-domain-2 5

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Ortholog group
SpeciesGenes
Allium cepag273767.t1; g428730.t1; g473895.t1; g509784.t1
Allium fistulosumAfisC4G03037; AfisC6G00047; AfisC7G02380
Allium sativumAsa0G01171.1; Asa0G01626.1; Asa0G02323.1; Asa0G02600.1; Asa0G03659.1; Asa2G06552.1; Asa3G02984.1; Asa3G02985.1; Asa3G02986.1; Asa3G02987.1; Asa3G02988.1; Asa3G04544.1; Asa4G01724.1; Asa4G03168.1; Asa4G03173.1; Asa7G07515.1; Asa8G00373.1; Asa8G05976.1; Asa8G05977.1
Arabidopsis thaliana
Oryza sativaLOC_Os01g72810.1; LOC_Os04g23600.1; LOC_Os04g23620.1; LOC_Os04g23720.1; LOC_Os04g23760.1; LOC_Os06g35870.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF01453.21B_lectinDomain10920267.57.9e-19
PF08276.8PAN_2Domain36042224.02.7e-05
PF00069.22PkinaseDomain527791179.47.9e-53

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04733IRAK4; interleukin-1 receptor-associated kinase 4EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
NOD-like receptor signaling pathwayko04621
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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