result

Gene information

Detail information of g512564

Location

Gene	Chr	Start	End	Strand
g512564	Scaffold_89646:HRSCAF_472732	938657	941195	-

Sequences

CDS

Protein

Gene

>g512564.t1
ATGAAACAATCACCTACTACTGCACTACGGCAATATCTGTTATGCTCCATTTCTGACTTCAAGAAAGCAAAAGGCAGAATTTTGTCATCTTCAAGACTTGGGCCAAAGATGATCAAAAAAGGCACCGGAGGTTGTCAATGGCGAAGCTGGTGGTGGGAGGATACCGAAGATATGTTGGTCGGTGACTGTAGGTCATAGAAAGGTATGAGAGTGTGTGTACACGTGCACAACATGCACAGGTATATAGAAGGGAATGCACATGGATCGTATGCTGCAGTTTGTTGATATTTGTTAATTAACTAACTTGGGTTAATCTTTGTATTAGGATTAGTTTAGAGCCATTATGATTCATGCTATAAATACTGATTAAGATTATGATTAAAATATAAGTGTCGAATGAATAATAATCAGTTTTCAAATTCTTTTTATCTTCTTATTTGTGCAGTTAATGCCCGCTATAACCCCGTTACAATCCTGCTATATCTCGCAACGGATTTCTACTGCTACGATTTTTTCATATATTTCCATACACGGTCTTCCCACTTTAAGCTCCGCTATTCCCGCTATATTCTGTTATTTCCGTTATATCTTCTTTAAAGAAATGAATTGAAAAATGACATTTATACATTATAAATATTATGAAATTAATTTATTGATTGAATTTTTAATATATTTTCAGACATAAAATATTCTAATATTCTAATAAATTCAATTATGTTATATAATATTTTTATGTTTATTTACAGTATATGCGTACACATTTTTAGTTAATATTATTTATGTATTAATTATAACTCAATTGAATGTTAATTTTAATTTTATATACCATTTATATGTTTGTGAAAACATTAAGTATGAGTTTTATATGCTATTTTAGAGTCATCTTCTATATTCTCGTTGCGTCTCCGCTATAACTTTTTGCACCTCCGCCGCATTGAGCTGCCGAGCACTTTAACCGCACAGCTACTTATGTTCTTCTTTCTCGTTTCTTGTGTGAATTCTTACTGCTAATTCTCACCATCATTCTCTTCTATGCTTTCTTCTAATCTTATAGTATACTGCTACTTCTCCCTAACATTCCTATACAAACTTGTTTGCTTTCACCTTCCAATACCATGGCAAATTCGTGTTCACTTTCCCTCAACATCTCTTCTGCATTATTATTCTAACTTGTCTCCATTTCCAAACTACCCTGAACTCACCCTAACTATCCAGTTTCAACCAGAAGCCTGAAACCATGATGACCAGAAACAAGAAAAAGCAATAAGGGCCTACCAAATTAGTATCGTAGAAGCCTGATGAGCCAGAAACCTCCTCTCATCACTTCAACGATCCTGAAAATGGCCACCAAGATGACAGCAAACTCTCCATGCCTGATCTTGATGGTGAAAATGAATTTTGTGCAAGGCAAGAACATATAAATTATTGAACCACCAATGGATTAATACAACTGCAAGGAGCACGGCAAGAGCTCCATAACTCTGATCAAAAAATTGCATCGAACACTACAAGAAAAGTCTCAAGAAATGAATGGTAAAATGGATTTCTTAACTGCAACTATTGATTCTATAATTCAAAAAATAAGAAGTTAACAAGATTTCATCCATAGCCACATTTCAAGAACAACAACAAAGCCTATTCGAAATCCCAATTAAATACTCTATAATTTTGATCAAACCCCACCAGCAAATACAAGAGCACCTCCATACATACCGCTATATCGGAGTTCTCCAACAAAAAGCCTTCAAAAAGCAACAATTCAAAAGGAAACAAGCTCATCATCCAATGGCAGACCCCATCTTCTAAACTGCACCACTTGCTCCATCAAGAAATTAGAAGACACAACTCGAGGATTGTCTATAAATACTCAGATGCCAGTCAGCAGCAAAAATTATGTGTTATCCGTTGGAAATTGGAGCCTAGGATTTGTTCTAAATGTAAGAGTGAGATATTTCGCTGAAGCATGTCAATCAAAGCATTGGCATGTAGGTCATAAATTGAAATGCAAGTCGTCAATTCCTTCAAAAGATTCACAGTATTCAAATTTTAGAGAAGTCATTCATCCAAACAACTTAAACGACTTAACAAAAGATAATAAGGGAAATGCATGTTCATGCAGTGCTTCGTGGAAATATTCTTATGATGAATTATCTGCTACCAGCAATAATTTCAGTGGTGATTGTTTATTGGGAAGAGGAGGATATGGTTATGGTTATGTTTATGTCGGAAAACTAAAGCCACATGCCAGATTCTGGCTATAAAGAAGCTTCATAATAATGATGGTCATCAACGTTATTTGCATCTTAAGCACAATCCACCAGTTATACACAGAGACCTGAAACGCTCTAATATATTGCTTGGGGAGGGTTACCATGCGAAATTATCAGATTTTGGCTTTGCCAAAGAAGGACCAGCAGGTGATAAACCACATGTTAGAACAGCTATTGTAGGAACTGATGGATATATTTCCCCTGAATATGCTAGTACAAATAGAATGACCGCTAAATCTGATATATATGGTTTTGGGATAGTGCTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020252636.1	1.4e-25	probable serine/threonine-protein kinase PBL7 isoform X1
Swissprot	Q1PDV6.1	5.6e-27	Receptor-like cytoplasmic kinase PBL27
trEMBL	A0A5P1FK15	1.0e-25	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G18610.1	67.90	7e-28	120		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
g512564	AT5G18610.2	81	26	97	177	197	277	67.90	7e-28	120
g512564	AT5G18610.1	81	26	97	177	197	277	67.90	7e-28	120
g512564	AT5G13160.1	81	29	97	177	200	280	64.20	1e-26	115

Ortholog group

Species	Genes
Allium cepa	g512564.t1
Allium fistulosum	AfisC4G01287
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	97	177	69.1	3.4e-19

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0002218	P	activation of innate immune response
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0002253	P	activation of immune response
GO:0002376	P	immune system process
GO:0002682	P	regulation of immune system process
GO:0002684	P	positive regulation of immune system process
GO:0002757	P	immune response-activating signal transduction
GO:0002758	P	innate immune response-activating signal transduction
GO:0002764	P	immune response-regulating signaling pathway
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0042742	P	defense response to bacterium
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0007165	P	signal transduction
GO:0007178	P	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006955	P	immune response
GO:0007154	P	cell communication
GO:0007166	P	cell surface receptor signaling pathway
GO:0007167	P	enzyme linked receptor protein signaling pathway
GO:0008150	P	biological_process
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009617	P	response to bacterium
GO:0009814	P	defense response, incompatible interaction
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009966	P	regulation of signal transduction
GO:0009967	P	positive regulation of signal transduction
GO:0009987	P	cellular process
GO:0010646	P	regulation of cell communication
GO:0010647	P	positive regulation of cell communication
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0023051	P	regulation of signaling
GO:0023056	P	positive regulation of signaling
GO:0031347	P	regulation of defense response
GO:0031349	P	positive regulation of defense response
GO:0036211	P	protein modification process
GO:0038023	F	signaling receptor activity
GO:0043170	P	macromolecule metabolic process
GO:0043207	P	response to external biotic stimulus
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0045087	P	innate immune response
GO:0045088	P	regulation of innate immune response
GO:0045089	P	positive regulation of innate immune response
GO:0046777	P	protein autophosphorylation
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0048583	P	regulation of response to stimulus
GO:0048584	P	positive regulation of response to stimulus
GO:0050776	P	regulation of immune response
GO:0050778	P	positive regulation of immune response
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:0080134	P	regulation of response to stress
GO:0098542	P	defense response to other organism
GO:1900457	P	regulation of brassinosteroid mediated signaling pathway
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network