Detail information of g517809
| Gene | Chr | Start | End | Strand |
|---|
| g517809 | Scaffold_90283:HRSCAF_473369 | 42043 | 68753 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_008794445.1 | 4.7e-130 | CCR4-NOT transcription complex subunit 9-like isoform X1 |
| Swissprot | Q5R6Z6.2 | 2.2e-92 | Cell differentiation protein RQCD1 homolog |
| trEMBL | A0A8B7C9D4 | 3.4e-130 | CCR4-NOT transcription complex subunit 9-like isoform X1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT3G20800.1 | 70.53 | 2e-125 | 446 | | Cell differentiation, Rcd1-like protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| g517809 | AT3G20800.1 | 319 | 87 | 3 | 356 | 670 | 1 | 316 | 70.53 | 2e-125 | 446 |
| g517809 | AT5G12980.1 | 272 | 76 | 0 | 386 | 657 | 29 | 300 | 72.06 | 3e-114 | 409 |
| g517809 | AT2G32550.1 | 273 | 162 | 5 | 393 | 652 | 51 | 320 | 34.80 | 4e-35 | 146 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF04078.10 | Rcd1 | Family | 395 | 652 | 413.3 | 3.1e-124 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K12606 | RCD1, CNOT9, CAF40; CCR4-NOT transcription complex subunit 9 | EC:- | RNA degradation | ko03018 |