Detail information of g52302


Location
GeneChrStartEndStrand
g52302Scaffold_29516:HRSCAF_268171245559253994-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020275484.11.2e-113zinc finger CCCH domain-containing protein 62-like isoform X2
SwissprotQ338N2.22.0e-62Zinc finger CCCH domain-containing protein 62
trEMBLA0A4S4DZL61.7e-98Zinc finger CCCH domain-containing protein 62-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G66840.146.275e-57 218SAP domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag52302.t1
Allium fistulosumAfisC1G05806
Allium sativumAsa0G02464.1; Asa3G02833.1; Asa7G07664.1; Asa8G04618.1
Arabidopsis thaliana
Oryza sativaLOC_Os10g25220.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02037.24SAPFamily10013331.01.3e-07
PF00642.21zf-CCCHFamily41142927.32.1e-06

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.