result

Gene information

Detail information of g525426

Location

Gene	Chr	Start	End	Strand
g525426	Scaffold_91154:HRSCAF_474240	425679	426882	-

Sequences

CDS

Protein

Gene

>g525426.t1
ATGGAAATTAAAAATGGTTGCTTAGAGAAAAAGAATGATACTGATGAAGAACAGGTTGCTCTTCCAGGATTCAGATTTCACCCTACAGATGAAGAGCTTGTTACCTTTTATTTGAGAAGAAAAGTGGAAAACAAGTCTATTTCTATAGAGATTATAAAGGAGATTGATGTATATAAGTTTGATCCTTGGGATCTTCCAAGTATGTTCTTTTATTTCATTTTTTTTTAATTTGTATTTGCTTTTGCCTTAACTCTTAATTCATACCAGGGAAGAGAAATTAATTTGCACATTAAAATGATATGCTTAAACTATGCACAATGAAAACAAAATTTGAGTTAATCATTCTATACAGCCTCTCCAATCAAACATATAAGCATGTAGAAGATGAAGATATATTATGAAAATGCTTGAAAAATGAATCATTAAAGTAATAATTAAAAATATAGATCAACACTCTAACAGCGCAATAATTATTATATGTTTAATTCTAAGTAGGAGTAAGTTCAGTGGGAATGGAAAAAGAATGGTACTTCTTCAGCCTGAGGGGAAGAAAATACAAGAACAGCATAAGGCCGAACCGGGTTACAGGTTCTGGATTCTGGAAGGCGACGGGGATAGATAGGCCCATTATGAATTCAGGATCCGATAACAATGACACCTGCATTGGGGTTGAAGAAGTCCTTGGTGTATTATATCGAAGTGCAGGAAAAGGAAAGAAGACAGACTGGATGATGCATGAGTTTAGACTTCCTTCTAATATAAAAGATACTGATACGTGTTCCCTAGCATGCAGGAAGCGGTACTATATTATACATCTTCATTTTACTATCATGTTTATTCAATTTGCGTCATTATCAAGTGATTTGTATGTTGCAAGTCAATGTTAAACGCAGGAAAAGTAATCTTTGCGATTTTTCTAAAGATTTTTCAATGTTGGACAAATATATTGTCTTTAGCATAAATTTCTGATAATTATGTAGAATTTATCACACTGATATTGAATTCAATGACAGCAATGTGATATAAAATTTGCAGGAAATATGGACAATATGCAGGATATTCAAGAGAAACATTTGTTCAAAGAAAGCATACAAACAGACAGCAGCATCAACTTCAATACAAACTGCGACTGATTCAAGTTCAAAAACAAACAGTAGTGTGGACTCTGATCATACAAACAATCAAGACCAAAACAGTGTTCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258282.1	6.1e-58	transcription factor JUNGBRUNNEN 1-like
Swissprot	Q9SK55.1	1.6e-55	NAC domain-containing protein 42
trEMBL	A0A5P1FAN5	4.4e-58	NAC domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G43000.1	67.81	5e-56	214	ANAC042;JUB1;NAC042	NAC domain containing protein 42

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g525426	AT2G43000.1	146	41	2	11	156	9	148	67.81	5e-56	214
g525426	AT5G39820.1	146	49	4	9	153	9	149	62.33	4e-49	191
g525426	AT1G26870.1	145	48	5	9	150	10	149	61.38	2e-48	188

Ortholog group

Species	Genes
Allium cepa	g525426.t1
Allium fistulosum	AfisC8G04681
Allium sativum	Asa1G01052.1
Arabidopsis thaliana	AT2G43000.1
Oryza sativa	LOC_Os03g56580.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	22	151	75.5	3.9e-21

Gene Ontology

Accession	Ontology	Name
GO:0006790	P	sulfur compound metabolic process
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005975	P	carbohydrate metabolic process
GO:0005984	P	disaccharide metabolic process
GO:0005991	P	trehalose metabolic process
GO:0005992	P	trehalose biosynthetic process
GO:0006082	P	organic acid metabolic process
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006520	P	cellular amino acid metabolic process
GO:0006560	P	proline metabolic process
GO:0006561	P	proline biosynthetic process
GO:0006725	P	cellular aromatic compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006970	P	response to osmotic stress
GO:0006972	P	hyperosmotic response
GO:0007275	P	multicellular organism development
GO:0007568	P	aging
GO:0008150	P	biological_process
GO:0008652	P	cellular amino acid biosynthetic process
GO:0009058	P	biosynthetic process
GO:0009064	P	glutamine family amino acid metabolic process
GO:0009084	P	glutamine family amino acid biosynthetic process
GO:0009311	P	oligosaccharide metabolic process
GO:0009312	P	oligosaccharide biosynthetic process
GO:0009403	P	toxin biosynthetic process
GO:0009404	P	toxin metabolic process
GO:0009628	P	response to abiotic stimulus
GO:0009651	P	response to salt stress
GO:0009700	P	indole phytoalexin biosynthetic process
GO:0009718	P	anthocyanin-containing compound biosynthetic process
GO:0009812	P	flavonoid metabolic process
GO:0009813	P	flavonoid biosynthetic process
GO:0009889	P	regulation of biosynthetic process
GO:0009987	P	cellular process
GO:0010120	P	camalexin biosynthetic process
GO:0010150	P	leaf senescence
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0016051	P	carbohydrate biosynthetic process
GO:0016053	P	organic acid biosynthetic process
GO:0018130	P	heterocycle biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019438	P	aromatic compound biosynthetic process
GO:0019748	P	secondary metabolic process
GO:0019752	P	carboxylic acid metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0034637	P	cellular carbohydrate biosynthetic process
GO:0034641	P	cellular nitrogen compound metabolic process
GO:0042430	P	indole-containing compound metabolic process
GO:0042435	P	indole-containing compound biosynthetic process
GO:0042440	P	pigment metabolic process
GO:0042538	P	hyperosmotic salinity response
GO:0043436	P	oxoacid metabolic process
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044249	P	cellular biosynthetic process
GO:0044262	P	cellular carbohydrate metabolic process
GO:0044271	P	cellular nitrogen compound biosynthetic process
GO:0044272	P	sulfur compound biosynthetic process
GO:0044281	P	small molecule metabolic process
GO:0044283	P	small molecule biosynthetic process
GO:0044550	P	secondary metabolite biosynthetic process
GO:0046148	P	pigment biosynthetic process
GO:0046217	P	indole phytoalexin metabolic process
GO:0046283	P	anthocyanin-containing compound metabolic process
GO:0046351	P	disaccharide biosynthetic process
GO:0046394	P	carboxylic acid biosynthetic process
GO:0046483	P	heterocycle metabolic process
GO:0048366	P	leaf development
GO:0048367	P	shoot system development
GO:0048519	P	negative regulation of biological process
GO:0048731	P	system development
GO:0048827	P	phyllome development
GO:0048831	P	regulation of shoot system development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051093	P	negative regulation of developmental process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051239	P	regulation of multicellular organismal process
GO:0051241	P	negative regulation of multicellular organismal process
GO:0051252	P	regulation of RNA metabolic process
GO:0052314	P	phytoalexin metabolic process
GO:0052315	P	phytoalexin biosynthetic process
GO:0052317	P	camalexin metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0080090	P	regulation of primary metabolic process
GO:0099402	P	plant organ development
GO:1900055	P	regulation of leaf senescence
GO:1900056	P	negative regulation of leaf senescence
GO:1901360	P	organic cyclic compound metabolic process
GO:1901362	P	organic cyclic compound biosynthetic process
GO:1901564	P	organonitrogen compound metabolic process
GO:1901566	P	organonitrogen compound biosynthetic process
GO:1901576	P	organic substance biosynthetic process
GO:1901605	P	alpha-amino acid metabolic process
GO:1901607	P	alpha-amino acid biosynthetic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000024	P	regulation of leaf development
GO:2000026	P	regulation of multicellular organismal development
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0090693
GO:0140110
GO:1905622

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network