Detail information of g52996


Location
GeneChrStartEndStrand
g52996Scaffold_29717:HRSCAF_270723211199217366-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020251691.13.6e-156rust resistance kinase Lr10-like isoform X1
SwissprotP93604.17.0e-133Probable receptor-like serine/threonine-protein kinase LRK10
trEMBLA0A804K6M02.2e-155non-specific serine/threonine protein kinase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G38280.155.759e-81 298PR5KPR5-like receptor kinase

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag136912.t1; g52996.t1
Allium fistulosumAfisC2G00299
Allium sativumAsa5G00609.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13947.3GUB_WAK_bindDomain3410428.02.8e-06
PF00069.22PkinaseDomain332539156.19.9e-46

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04733IRAK4; interleukin-1 receptor-associated kinase 4EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
NOD-like receptor signaling pathwayko04621
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.